Table 2.
Relative Errors for Solvent Reconstructions from the Different pRDF Atom Sets
| CNO-pRDFs | CNOS-PRDFs | side chain-pRDFs | ||
|---|---|---|---|---|
| Reconstructions from Protein Averaged Distributions | ||||
| relative error within 4–6 Å shell | side chain | 0.599% | 0.574% | 0.427% |
| backbone | 0.841% | 0.847% | 0.888% | |
| heavy atom | 0.53% | 0.51% | 0.36% | |
| total relative error | side chain | 4.43% | 4.44% | 4.41% |
| backbone | 6.44% | 6.39% | 6.43% | |
| heavy atom | 4.27% | 4.27% | 4.34% | |
| RMSD | side chain | 0.38% | 0.37% | 0.39% |
| backbone | 0.51% | 0.51% | 0.52% | |
| heavy atom | 0.71% | 0.71% | 0.73% | |
| Reconstructions from Small-Molecule Distributions | ||||
| relative error within 4–6 Å shell | side chain | 1.37% | 1.34% | 0.444% |
| backbone | 1.05% | 1.01% | 0.958% | |
| heavy atom | 1.3% | 1.3% | 0.39% | |
| total relative error | side chain | 5.76% | 5.62% | 4.42% |
| backbone | 6.65% | 6.48% | 6.05% | |
| heavy atom | 5.42% | 5.29% | 4.19% | |
| RMSD | side chain | 0.37% | 0.37% | 0.37% |
| backbone | 0.50% | 0.50% | 0.50% | |
| heavy atom | 0.70% | 0.70% | 0.71% |