Table 2. Loci examined among 439 outbred snails.
Locus a | Scaffold b | N c | Alleles (% Frequency) d | Other loci in LD e | Infection Odds Impact f | References g |
---|---|---|---|---|---|---|
sod1 | 10 | 439 | A (44), B (33), C (21), D (2) | bmplys | 2.2** | [24] |
RADres1 | 115 | 439 | E (68), F (32) | RADres2 | 1.8** | this study |
RADres2 | 332 | 439 | G (73), H (16), I (11) | RADres1 | 1.7** | this study |
bmplys | 10 | 405 | J (63), K (37) | sod1 | 1.9** | [38] |
aif | 1380 | 439 | L (59), M (25), N (10), O (6) | none | none | [23] |
infPhox | 174 | 439 | P (69), Q (23), R (6), S (1) | none | none | [23] |
prx1 | 838 | 439 | T (61), U (36), V (3) | none | none | [23] |
grc | 1 | 278 | W (38), X (33), Y (29) | none | none | [3] |
aName of gene or marker
bScaffold number in B. glabrata reference genome version BglaB1
cNumber of genotyped and phenotyped outbred snails
dFrequency of each allele, named alphabetically
eOther loci showing significant linkage disequilibrium with each locus
fMultiplicative decrease in odds of infection conveyed by each copy of a resistance allele at each locus, significance (p < 0.01) conveyed with **
gFirst description of locus