Table 1.
MIGS ID | Property | Term | Evidence code |
---|---|---|---|
Classification | Domain Bacteria | TAS [40] | |
Phylum Proteobacteria | TAS [41,42] | ||
Class Alphaproteobacteria | TAS [42,43] | ||
Order Rhizobiales | TAS [44] | ||
Family Bradyrhizobiaceae | TAS [45] | ||
Genus Bradyrhizobium | TAS [46] | ||
Species Bradyrhizobium sp. | IDA | ||
Gram stain | Negative | IDA | |
Cell shape | Rod | IDA | |
Motility | Motile | IDA | |
Sporulation | Non-sporulating | NAS | |
Temperature range | Unknown | NAS | |
Optimum temperature | 28°C | NAS | |
pH range; Optimum | Unknown | NAS | |
Carbon source | Varied | NAS | |
Energy source | Chemoorganotroph | NAS | |
MIGS-6 | Habitat | Soil, root nodule, host | TAS [6] |
MIGS-6.3 | Salinity | Non-halophile | NAS |
MIGS-22 | Oxygen requirement | Aerobic | NAS |
MIGS-15 | Biotic relationship | Free living, symbiotic | TAS [6] |
MIGS-14 | Pathogenicity | Non-pathogenic | NAS |
Biosafety level | 1 | TAS [47] | |
Isolation | Root nodule of Andira inermis | TAS [6] | |
MIGS-4 | Geographic location | Tres Piedras, Costa Rica | TAS [6] |
MIGS-5 | Sample collection | July 14, 2000 | IDA |
MIGS-4.1 | Latitude | 9.2835 | IDA |
MIGS-4.2 | Longitude | −83.8533 | IDA |
MIGS-4.3 | Depth | 5 cm | IDA |
MIGS-4.4 | Altitude | 50 m | IDA |
Evidence codes – IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). Evidence codes are from the Gene Ontology project [48,49].