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. 2015 Jun 14;10:33. doi: 10.1186/s40793-015-0007-z

Table 1.

Classification and general features of Bradyrhizobium sp. Ai1a-2 in accordance with the MIGS recommendations [38] published by the Genome Standards Consortium [39]

MIGS ID Property Term Evidence code
Classification Domain Bacteria TAS [40]
Phylum Proteobacteria TAS [41,42]
Class Alphaproteobacteria TAS [42,43]
Order Rhizobiales TAS [44]
Family Bradyrhizobiaceae TAS [45]
Genus Bradyrhizobium TAS [46]
Species Bradyrhizobium sp. IDA
Gram stain Negative IDA
Cell shape Rod IDA
Motility Motile IDA
Sporulation Non-sporulating NAS
Temperature range Unknown NAS
Optimum temperature 28°C NAS
pH range; Optimum Unknown NAS
Carbon source Varied NAS
Energy source Chemoorganotroph NAS
MIGS-6 Habitat Soil, root nodule, host TAS [6]
MIGS-6.3 Salinity Non-halophile NAS
MIGS-22 Oxygen requirement Aerobic NAS
MIGS-15 Biotic relationship Free living, symbiotic TAS [6]
MIGS-14 Pathogenicity Non-pathogenic NAS
Biosafety level 1 TAS [47]
Isolation Root nodule of Andira inermis TAS [6]
MIGS-4 Geographic location Tres Piedras, Costa Rica TAS [6]
MIGS-5 Sample collection July 14, 2000 IDA
MIGS-4.1 Latitude 9.2835 IDA
MIGS-4.2 Longitude −83.8533 IDA
MIGS-4.3 Depth 5 cm IDA
MIGS-4.4 Altitude 50 m IDA

Evidence codes – IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). Evidence codes are from the Gene Ontology project [48,49].