Table 1.
Summary of output from IonTorrent and 454 sequencing for seven F. psychrophilum strains
| Sample | Mb totala | Number of reads (in millions) | Mean read length (in bp) |
|---|---|---|---|
| CSF 259–93 wild-type (CW)b | 603 | 2.46 | 245 |
| CSF 259–93 passaged w/o Rif (CN)b | 346 | 1.37 | 254 |
| CSF 259–93 passaged with Rif (CR)b | 772 | 2.97 | 261 |
| THC 02–90 wild-type (TW)b | 620 | 2.38 | 260 |
| THC 02–90 passaged w/o Rif (TN)b | 676 | 2.78 | 244 |
| THC 02–90 passaged with Rif (TR)b | 666 | 2.78 | 240 |
| CSF 259–93 wild-type (CW)c | 63.1 | 0.18 | N/A |
| CSF 259-93B.17 (B17)c | 167 | 0.45 | N/A |
aMb total = total number of mega bases of DNA sequences
bResults from Ion Torrent sequencing, 316 chip
cResults from 454 sequencing