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. 2015 Oct 21;383:28–43. doi: 10.1016/j.jtbi.2015.07.011
Symbol Definition Examples

Σ Set of alleles {0,1}, {A,T,G,C}
G Space of genotypes Σn (strings of length n over the alphabet Σ)
P Space of phenotypes Genetic traits
S Space of all distributions of genotype frequencies
P(t) A finite collection of genotypes at time t {(0,0), (0,1), (0,0)}
D(t) A probability distribution describing the probability of sampling any genotype
φ:GP Genotype–phenotype mapping Transformation from genes to proteins then traits
V:GkG Variation operator Mutation (M), recombination (R)
S:GkG Selection operator Uniform, proportional selection
ψ Mapping between populations at each time step, composition of variation and selection operators ψ=VS, P(t+1)=ψ(P(t))
ϕ Mapping between abstract distributions at each time step, composition of lifted variation and selection operators ϕ=V^S^, D(t+1)=ϕ(D(t))
α Mapping from populations to distributions
βk Distribution sampling operator P(t+1)=βk(D(t+1))
w The probability of a genotype to be present in the next generation. Fitness (sensu PG) or reproductive rate (sensu EC)