TABLE 5.
Overview of the SNP profiles obtained for the eight selected SNPs markers in the eight whole genome-sequenced strains and the reference strain M. pneumoniae M129
| Strain/isolate | SNP namea |
SNP profile | SNP type | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| gyrA446 | glpK360 | rpoB168 | rplB234 | gmk578 | MPN442376 | MPN5821013 | P12774 | |||
| B4560 | A | A | G | C | A | A | A | G | AAGCAAAG | SNP1 |
| B3996 | A | A | G | A | A | A | A | G | AAGAAAAG | SNP2 |
| M2285 | A | A | G | C | A | C | A | G | AAGCACAG | SNP3 |
| J382 | A | A | G | C | A | C | G | G | AAGCACGG | SNP4 |
| M129 | A | G | G | C | A | C | G | G | AGGCACGG | SNP5 |
| F59 | G | G | A | C | A | C | G | A | GGACACGA | SNP6 |
| B3896 | G | G | A | C | A | C | G | G | GGACACGG | SNP7 |
| FH | A | G | A | C | A | C | G | A | AGACACGA | SNP8 |
| B1145 | A | A | G | C | G | A | A | G | AAGCGAAG | SNP9 |
a
The SNP name corresponds to the name or the mnemonic of the gene containing the SNP and the position (superscript number) of the SNP in the gene of M. pneumoniae M129 genome.