TABLE 1.
Organism | No. of isolates | No. with correct IDa (%) |
No. with discordant ID | No. with no ID | ||
---|---|---|---|---|---|---|
Species level | Genus level | Combined | ||||
Total | 400 | 343 (85.8) | 15 (3.7) | 358 (89.5) | 8 | 34 |
Gram-positive organisms | 248 | 197 (79.4) | 13 (5.2) | 210 (84.7) | 7 | 31 |
Staphylococcus aureus | 58 | 56 (96.6) | 0 | 56 (96.6) | 1 | 1 |
CoNSb | 95 | 76 (80.0) | 0 | 76 (80.0) | 2 | 17 |
Enterococcus faecalis | 18 | 18 (100) | 0 | 18 (100) | 0 | 0 |
E. faecium | 7 | 6 (85.7) | 0 | 6 (85.7) | 0 | 1 |
Streptococcus pneumoniae | 7 | 7 (100) | 0 | 7 (100) | 0 | 0 |
S. viridans group | 9 | 4 (44.4) | 0 | 4 (44.4) | 1 | 4 |
S. anginosus group | 7 | 3 (42.9) | 0 | 3 (42.9) | 1 | 3 |
S. bovis group | 3 | 3 (100) | 0 | 3 (100) | 0 | 0 |
S. pyogenes | 2 | 1 (50.0) | 0 | 1 (50.0) | 0 | 1 |
S. agalactiae | 5 | 5 (100) | 0 | 5 (100) | 0 | 0 |
S. dysgalactiae | 2 | 1 (50.0) | 0 | 1 (50.0) | 0 | 1 |
S. suis | 1 | 1 (100) | 0 | 1 (100) | 0 | 0 |
Bacillus species | 21 | 9 (42.9) | 10 (47.6) | 19 (90.5) | 1 | 1 |
Paenibacillus species | 4 | 0 | 3 (75.0) | 3 (75.0) | 0 | 1 |
Listeria monocytogenes | 2 | 1 (50.0) | 0 | 1 (50.0) | 1 | 0 |
Corynebacterium species | 1 | 0 | 0 | 0 | 0 | 1 |
Lactobacillus casei | 1 | 1 (100) | 0 | 1 (100) | 0 | 0 |
Dermabacter hominis | 1 | 1 (100) | 0 | 1 (100) | 0 | 0 |
Microbacterium flavescens | 1 | 1 (100) | 0 | 1 (100) | 0 | 0 |
Gram-negative organisms | 152 | 146 (96.1) | 2 (1.3) | 148 (97.4) | 1 | 3 |
Enterobacteriaceae | 133 | 130 (97.7) | 2 (1.5) | 132 (99.2) | 0 | 1 |
Escherichia coli | 78 | 78 (100) | 0 | 78 (100) | 0 | 0 |
Klebsiella species | 25 | 25 (100) | 0 | 25 (100) | 0 | 0 |
Enterobacter species | 10 | 10 (100) | 0 | 10 (100) | 0 | 0 |
Proteus species | 10 | 10 (100) | 0 | 10 (100) | 0 | 0 |
Serratia marcescens | 7 | 7 (100) | 0 | 7 (100) | 0 | 0 |
Raoultella ornithinolytica | 1 | 0 | 1 (100) | 1 (100) | 0 | 0 |
Salmonella species (nontyphi) | 1 | 0 | 1 (100) | 1 (100) | 0 | 0 |
Pseudomonas aeruginosa | 10 | 10 (100) | 0 | 10 (100) | 0 | 0 |
Stenotrophomonas maltophilia | 2 | 2 (100) | 0 | 2 (100) | 0 | 0 |
Campylobacter jejuni | 1 | 0 | 0 | 0 | 0 | 1 |
Moraxella atlantae | 1 | 0 | 0 | 0 | 0 | 0 |
M. osloensis | 1 | 1 (100) | 0 | 1 (100) | 0 | 1 |
Brevundimonas vesicularis | 1 | 0 | 0 | 0 | 0 | 1 |
Sphingobacterium species | 1 | 0 | 0 | 0 | 0 | 1 |
Anaerobic organisms | ||||||
Clostridium clostridioforme | 1 | 1 (100) | 0 | 1 (100) | 0 | 0 |
C. ramosum | 1 | 1 (100) | 0 | 1 (100) | 0 | 0 |
Propionibacterium acnes | 1 | 1 (100) | 0 | 1 (100) | 0 | 0 |
Bacteroides fragilis | 2 | 2 (100) | 0 | 2 (100) | 0 | 0 |
B. thetaiotaomicron | 1 | 1 (100) | 0 | 1 (100) | 0 | 0 |
ID, identification.
CoNS, coagulase-negative Staphylococcus.