Table 4.
Genome statistics
| Attribute | Value | % of Total |
|---|---|---|
| Genome size (bp) | 4,373,835 | 100.0 |
| DNA coding (bp) | 3,762,570 | 86.0 |
| DNA G + C (bp) | 1,940,626 | 44.4 |
| DNA scaffolds | 3 | |
| Total genes | 3,912 | 100.0 |
| Protein coding genes | 3,783 | 96.7 |
| RNA genes | 129 | 3.3 |
| Pseudo genes | 55 | 1.4 |
| Genes in internal clusters | 447 | 11.4 |
| Genes with function prediction | 3,317 | 84.8 |
| Genes assigned to COGs | 2,620 | 66.9 |
| Genes with Pfam domains | 3,317 | 84.8 |
| Genes with signal peptides | 592 | 15.1 |
| Genes with transmembrane helices | 1,037 | 26.5 |
| CRISPR repeats | 0 | 0.0 |
The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome