TABLE 1 .
Listing of Yersinia pestis strains, their accession numbers, and genome sizes in this data set
Code | Strain | Country of origin | Accession no.a | Assembly status | Size (% G+C)b |
---|---|---|---|---|---|
BYA | 1412 | Georgia | CP006783 (Chr) CP006780 (pCD) CP006779 (pMT) | Finished | 4,733,482 (47.6) |
CAY | 1413 | Georgia | CP006762 (Chr) CP006761 (pCD) CP006760 (pMT) | Finished | 4,736,923 (47.6) |
DYA | 1670 | Georgia | AYLR00000000 (unscaffolded) | Improved high-quality draft | 4.71 Mb (est) (47.6) |
FKY | 790 | Kyrgyzstan | CP006806 (Chr) CP006807 (pMT) CP006808 (pPCP) | Finished | 4,785,488 (47.6) |
PYA | 1522 | Armenia | CP006758 (Chr) CP006757 (pCD) CP006756 (pMT) | Finished | 4,738,644 (47.6) |
RYP | 2944 | Russian Federation | CP006792 (Chr) CP006791 (pCD) CP006790 (pMT) CP006793 (pPCP) | Finished | 4,672,740 (47.5) |
VIP | 3067 | Georgia | CP006754 (Chr) CP006753 (pCD) CP006752 (pMT) | Finished | 4,736,090 (47.5) |
WYP | 8787 | Georgia | CP006748 (Chr) CP006747 (pCD) CP006746 (pMT) | Finished | 4,675,987 (47.6) |
YAE | 3770 | Georgia | CP006751 (Chr) CP006750 (pCD) CP006749 (pMT) | Finished | 4,735,667 (47.6) |
YPY | 14735 | Armenia | AYLS00000000 (unscaffolded) | Improved high-quality draft | 4.69 Mb (est) (47.6) |
ZPY | 1045 | Azerbaijan | CP006794 (Chr) CP006795 (pCD) CP006797 (pMT) CP006796 (pPCP) | Finished, noncontiguous (1 gap) | 4.68 Mb (est) (47.5) |
Chr, chromosome; pCD, pMT, and pCP are plasmids.
Values for the genome sizes are shown in bp, unless otherwise indicated. est, estimated.