Table 1.

Correlation and agreement between Hi-C and 450 k-based eigenvector estimates of genome compartments. Thresholding refers to excluding genomic bins where the entries of the relevant eigenvector have an absolute value less than 0.01

		Chromosome 14		Genome
No threshold
	Correlation	0.85	0.75	0.70	0.74
	Agreement	83.7 %	79.1 %	79.0 %	79.5 %
	Bins retained	100 %	100 %	100 %	100 %
Threshold, methylation
	Correlation	0.87	0.78	0.74	0.77
	Agreement	88.8 %	83.4 %	87.9 %	87.9 %
	Bins retained	86 %	85 %	78 %	79 %
Threshold, methylation and Hi-C
	Correlation	0.89	0.84	0.77	0.81
	Agreement	93.0 %	90.5 %	92.6 %	92.8 %
	Bins retained	76 %	67 %	66 %	64 %