Table 1. Candidate regulatory SNPs in GWAS locus 5q31.1.
SNP | Position (hg19) | Major/Minor Allele | CHB MAF | Overlapping Peaks | Histone Modification | Cell Line |
---|---|---|---|---|---|---|
rs2193941 | 134469594 | A/G | 0.28 | 134469520–134469630 | H3k4me3 | Caco2 |
rs17716310 | 134476759 | A/C | 0.31 | 134475122–134478405 | H3k4me1 | HCT116 |
134475349–134477528 | H3k27ac | HCT116 | ||||
rs7703385 | 134478074 | C/G | 0.28 | 134475122–134478405 | H3k4me1 | HCT116 |
Abbreviations: CHB, Han Chinese in Beijing, China; MAF, minor allele frequency.