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. 2015 Sep 18;10(9):e0138314. doi: 10.1371/journal.pone.0138314

Table 1. Summary of causative mutations identified after molecular analysis in the investigated cases.

Sample ID Definitive Medical Diagnosis Gene ID NM Number cDNA Level Change Protein Level Change NGS Coverage HGMD* MIM Number Classification #
R6 Spondylocarpotarsal Synostosis FLNB NM_001457.3 c.1945C>T p.(Arg649Ter) 89X CM040999 272460 Pathogenic
R34 Neurofibromatosis-Noonan syndrome NF1 NM_000267.3 c.625C>T p.(Gln209Ter) 139X NA 162200 Pathogenic
R43 Geleophysic dysplasia 2 FBN1 NM_000138 c.5284G>A p.(Gly1762Ser) 99X CM115510 614185 Pathogenic
R47 Ectrodactyly, Ectodermal Dysplasia, and Cleft Lip/Palate syndrome 3 TP63 NM_001114978.1 c.740A>G p.(His247Arg) 133X CM100075 604292 Pathogenic
R82 Apert syndrome FGFR2 NM_022970.3 c.755C>G p.(Ser252Trp) 86X CM970526 101200 Pathogenic
R85 Nail-patella syndrome LMX1B NM_001174146.1 c.306C>G p.(Tyr102Ter) 35X NA 161200 Likely Pathogenic
R99 Cleidocranial dysplasia RUNX2 NM_001015051.3 c.476G>A p.(Gly159Asp) 125X NA 119600 Likely Pathogenic
R121 Weaver syndrome EZH2 NM_152998.2 c.149T>C p.(Leu50Ser) 194X NA 277590 Likely Pathogenic
R122 Townes-Brock syndrome SALL1 NM_002968.2 c.949C>T p.(Pro317Ser) 28X NA 107480 Likely Pathogenic
R150 Hypochondroplasia FGFR3 NM_001163213.1 c.1626C>G p.(Asn542Lys) 96X CM950475 146000 Pathogenic
R156 Wolcott-Rallison syndrome EIF2AK3 NM_004836.5 c.1192C>T p.(Gln398Ter) 35X CM113379 226980 Pathogenic
R163 Spondyloepiphyseal Dysplasia, Congenital type COL2A1 NM_001844.4 c.3301G>A p.(Gly1101Arg) 294X NA 183900 Likely Pathogenic
R174 Trichrhinophalangeal syndrome I TRPS1 NM_014112.4 c.1693C>T p.(Gln565Ter) 177X NA 190350 Likely Pathogenic

*HGMD Access code.

#Variant Classification according to the ACMG and AMP guidelines [78]. NA: Not applicable.