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. Author manuscript; available in PMC: 2016 Oct 1.
Published in final edited form as: J Comp Neurol. 2015 May 12;523(14):2082–2110. doi: 10.1002/cne.23780

Table 2.

List S-nitrosylated proteins identified only under light-adapted conditions.

Protein Name Gene Accession Number Peptide Score
Apoptosis/Cell Death
  Bcl-2-like protein 13 Bcl2l13 B2L13_MOUSE 2
  Isoform 2 of Band 4.1-like protein 3 Epb41l3 E41L3_MOUSE 10
  Isoform 2 of Peptidyl-prolyl cis-trans isomerase FKBP8 Fkbp8 FKBP8_MOUSE 2
  Isoform 8 of Band 4.1-like protein 3 Epb41l3 E41L3_MOUSE 2
  MAP kinase-activating death domain protein Madd A2AGQ6_MOUSE 3
  Mitochondrial fission 1 protein Fis1 FIS1_MOUSE 2
  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 Ndufa13 NDUAD_MOUSE 3
Calcium Ion Regulation
  Calbindin
Calb1 CALB1_MOUSE 4
  Isoform 3 of Disks large homolog 4 Dlg4 DLG4_MOUSE 6
  Secretagogin
Cardiovascular
Scgn SEGN_MOUSE 7
  Alpha actinin 1a Actn1 A1BN54 MOUSE 2
  Carbonic anhydrase 14
Cell Adhesion
Ca14 CAH14_MOUSE 2
  Cadherin-2 Cdh2 CADH2_MOUSE 2
  Cell adhesion molecule 1 Cadm1 CADM1_MOUSE 8
  Cell adhesion molecule 2 (Fragment) Cadm2 CADM2_MOUSE 10
  Cell adhesion molecule 3 Cadm3 CADM3_MOUSE 2
  Contactin-1 Cntn1 CNTN1_MOUSE 7
  Isoform 2 of Neuronal cell adhesion molecule Nrcam NRCAM_MOUSE 4
  Limbic system-associated membrane protein Lsamp LSAMP MOUSE 4
  Neural cell adhesion molecule 1 Ncam1 E9QB01_MOUSE 2
  Neuroplastin Nptn NPTN_MOUSE 3
  Peripherin-2 Prph2 PRPH2_MOUSE 9
  Rod outer segment membrane protein 1 Rom1 ROM1_MOUSE 6
  Signal-regulatory protein alpha Sirpa Q6P6I8_MOUSE 3
  Transforming protein RhoA Rhoa RHOA MOUSE 3
Cell Cycle/Cell Division
  Casein kinase II subunit beta
Csnk2b CSK2B_MOUSE 2
  Cell cycle exit and neuronal differentiation protein 1 Cend1 CEND_MOUSE 3
  Cell division control protein 42 homolog Cdc42 CDC42_MOUSE 2
  Cyclin-dependent kinase 5 OS=Mus musculus Cdk5 CDK5_MOUSE 2
  Histone H2AX H2afx H2AX_MOUSE 2
  Isoform 2 of Septin-11 Sep11 SEP11_MOUSE 2
  Isoform Gamma-2 of Serine/threonine-protein phosphatase PP1-gamma catalytic subunit Ppp1cc PP1G_MOUSE 3
  Nuclear migration protein nudC Nudc NUDC_MOUSE 2
  Platelet-activating factor acetylhydrolase IB subunit alpha Pafah1b1 LIS1_MOUSE 4
  Putative adenosylhomocysteinase 2 Ahcyl1 SAHH2_MOUSE 2
  Serine/threonine-protein phosphatase Ppp3cb E0CZ78_MOUSE 2
  Serine-protein kinase ATM Atm ATM_MOUSE 2
Cell Growth/Proliferation
  Catenin beta-1
Ctnnb1 CTNB1_MOUSE 4
  Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 Hnrnpc HNRPC MOUSE 2
  Membrane-associated progesterone receptor component 1 Pgrmc1 PGRC1_MOUSE 2
  Membrane-associated progesterone receptor component 2 Pgrmc2 PGRC2_MOUSE 2
  Myotrophin Mtpn MTPN_MOUSE 2
  Neuromodulin Gap43 NEUM_MOUSE 2
  Neuronal growth regulator 1 Negr1 NEGR1_MOUSE 3
  Neuronal membrane glycoprotein M6-a Gpm6a GPM6A_MOUSE 5
  Prominin 1, isoform CRA_g Prom1 PROM1_MOUSE 2
Chaperone
  10 kDa heat shock protein, mitochondrial Hspe1 CH10_MOUSE 3
  26S proteasome non-ATPase regulatory subunit 5 Psmd5 PSMD5_MOUSE 2
  Coactosin-like protein Cotl1 COTL1_MOUSE 2
  DnaJ homolog subfamily A member 2 Dnaja2 DNJA2_MOUSE 2
  DnaJ homolog subfamily C member 5 Dnajc5 DNJC5_MOUSE 2
  Isoform 3 of Putative tyrosine-protein phosphatase auxilin Dnajc6 AUXI_MOUSE 4
  Large proline-rich protein BAG6 Bag6 BAG6_MOUSE 3
  Peptidyl-prolyl cis-trans isomerase B Ppib PPIB_MOUSE 3
  Phosducin-like protein Pdcl PHLP_MOUSE 2
Cytoskeleton
  Actin-related protein 2/3 complex subunit 3
Arpc3 ARPC3_MOUSE 3
  Alpha-adducin Add1 ADDA_MOUSE 8
  Alpha-centractin Actr1a ACTZ_MOUSE 2
  Destrin Dstn DEST_MOUSE 4
  Gephyrin Gphn GEPH_MOUSE 2
  Glycoprotein m6b, isoform CRA_g Gpm6b GPM6B_MOUSE 3
  IQ motif and SEC7 domain-containing protein 3 Iqsec3 IQEC3_MOUSE 2
  Isoform 2 of Rootletin Crocc CROCC_MOUSE 2
  Isoform 4 of Nesprin-1 Syne1 SYNE1_MOUSE 2
  Myristoylated alanine-rich C-kinase substrate Marcks MARCS_MOUSE 3
  Protein 4.1 Epb4.1 A2A841_MOUSE 12
  Protein kinase C and casein kinase substrate in neurons protein 2 Pacsin2 PACN2 MOUSE 2
DNA Metabolism/Regulation
  Prohibitin
Phb PHB_MOUSE 8
  Prohibitin-2 Phb2 PHB2_MOUSE 7
Endocytosis
  Adaptin ear-binding coat-associated protein 1
Necap1 NECP1_MOUSE 2
  Dynamin-3 Dnm3 DYN3_MOUSE 5
  Dynamin-like 120 kDa protein, mitochondrial Opa1 OPA1_MOUSE 2
  Isoform 3 of SH3-containing GRB2-like protein 3-interacting protein 1 Sgip1 SGIP1_MOUSE 3
  Secretory carrier-associated membrane protein 1 Scamp1 SCAM1_MOUSE 2
  Synaptophysin Syp SYPH_MOUSE 2
Energy Metabolism
  6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase 2 variant 4
Pfkfb2 B2Z892_MOUSE 2
  6-phosphofructokinase Pfkp Q8C605_MOUSE 8
  6-phosphofructokinase, muscle type Pfkm K6PF_MOUSE 2
  Adenine phosphoribosyltransferase Aprt APT_MOUSE 2
  ADP/ATP translocase 2 Slc25a5 ADT2_MOUSE 3
  ATP synthase F(0) complex subunit B1, mitochondrial Atp5f1 AT5F1_MOUSE 6
  ATP synthase subunit epsilon, mitochondrial Atp5e ATP5E_MOUSE 2
  ATP synthase subunit f, mitochondrial Atp5j2 ATPK_MOUSE 2
  ATP synthase subunit g, mitochondrial Atp5l ATP5L_MOUSE 2
  CDGSH iron-sulfur domain-containing protein 1 Cisd1 CISD1_MOUSE 3
  Citrate synthase, mitochondrial Cs CISY_MOUSE 8
  Creatine kinase M-type Ckm KCRM_MOUSE 2
  Cytochrome b-c1 complex subunit 7 Uqcrb Q9CQB4_MOUSE 4
  Cytochrome b-c1 complex subunit 9 Uqcr10 QCR9_MOUSE 2
  Cytochrome b-c1 complex subunit Rieske, mitochondrial Uqcrfs1 UCRI_MOUSE 7
  Cytochrome c oxidase subunit 4 isoform 1, mitochondrial Cox4i1 COX41_MOUSE 4
  Cytochrome c oxidase subunit 5A, mitochondrial Cox5a COX5A_MOUSE 7
  Cytochrome c oxidase subunit 7A2, mitochondrial Cox7a2 CX7A2_MOUSE 2
  Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial Dlat ODP2_MOUSE 6
  Electron transfer flavoprotein subunit alpha, mitochondrial Etfa ETFA_MOUSE 4
  Electron transfer flavoprotein subunit beta Etfb ETFB_MOUSE 3
  GTP:AMP phosphotransferase AK3, mitochondrial Ak3 KAD3_MOUSE 2
  Hexokinase-2 Hk2 HXK2_MOUSE 11
  Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial Idh3a IDH3A_MOUSE 8
  Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial Idh3g IDHG1_MOUSE 3
  Isocitrate dehydrogenase [NADP], mitochondrial Idh2 IDHP_MOUSE 4
  Isocitrate dehydrogenase 3 (NAD+) beta Idh3b Q91VA7_MOUSE 6
  Isoform 2 of Cytochrome c1, heme protein, mitochondrial Cyc1 CY1_MOUSE 6
  Isoform Short of Adenosine kinase Adk ADK_MOUSE 2
  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial Ndufa10 NDUAA_MOUSE 5
  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 Ndufa12 NDUAC_MOUSE 2
  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 Ndufa4 NDUA4_MOUSE 4
  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 Ndufa6 NDUA6_MOUSE 2
  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 Ndufa8 NDUA8_MOUSE 4
  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial Ndufa9 NDUA9_MOUSE 3
  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial Ndufb11 NDUBB_MOUSE 3
  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 Ndufb3 NDUB3_MOUSE 2
  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 Ndufb4 NDUB4_MOUSE 3
  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial Ndufb8 NDUB8_MOUSE 2
  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 Ndufb9 NDUB9_MOUSE 2
  NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Ndufv1 NDUV1_MOUSE 5
  NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Ndufv2 NDUV2_MOUSE 2
  NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial Ndufs2 NDUS2_MOUSE 2
  NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial Ndufs3 NDUS3_MOUSE 6
  NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial Ndufs7 NDUS7_MOUSE 2
  NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial Ndufs8 NDUS8_MOUSE 5
  NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial Ndufs1 NDUS1_MOUSE 14
  Phosphoglucomutase-2 Pgm2 PGM2_MOUSE 2
  Protein Ogdhl Ogdhl E9Q7L0_MOUSE 4
  Pyruvate carboxylase Pcx PYC_MOUSE 2
  Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial Pdha1 ODPA_MOUSE 5
  Pyruvate dehydrogenase E1 component subunit beta, mitochondrial Pdhb ODPB_MOUSE 7
  Stomatin-like protein 2, mitochondrial Stoml2 STML2_MOUSE 5
  Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Sdha DHSA_MOUSE 8
  Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial Sdhb DHSB_MOUSE 4
  Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial Suclg1 SUCA_MOUSE 2
  Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
Glycosylation
Sucla2 SUCB1_MOUSE 4
  Alpha-1,3/1,6-mannosyltransferase ALG2 Alg2 ALG2_MOUSE 3
  UDP-glucose:glycoprotein glucosyltransferase 1
Immune Response
Uggt1 UGGG1_MOUSE 5
  Neurotrimin Ntm NTRI_MOUSE 3
  Parathymosin Ptms PTMS_MOUSE 2
  Toll-interacting protein Tollip TOLIP_MOUSE 2
Ion Channel/Transporter
  Calcium-binding mitochondrial carrier protein Aralar1
Slc25a12 CMC1_MOUSE 15
  cGMP-gated cation channel alpha-1 Cnga1 CNGA1_MOUSE 7
  Excitatory amino acid transporter 1 Slc1a3 EAA1_MOUSE 5
  Excitatory amino acid transporter 2 Slc1a2 EAA2_MOUSE 5
  Isoform 2 of Protein tweety homolog 1 Ttyh1 TTYH1_MOUSE 2
  Isoform 2 of Vesicular inhibitory amino acid transporter Slc32a1 VIAAT_MOUSE 7
  Mitochondrial 2-oxoglutarate/malate carrier protein Slc25a11 M2OM_MOUSE 2
  Mitochondrial carrier homolog 2 Mtch2 MTCH2_MOUSE 2
  Mitochondrial glutamate carrier 1 Slc25a22 GHC1_MOUSE 4
  Monocarboxylate transporter 1 Slc16a1 MOT1_MOUSE 3
  Plasma membrane calcium-transporting ATPase 2 Atp2b2 AT2B2_MOUSE 3
  Potassium voltage-gated channel subfamily B member 1 Kcnb1 KCNB1_MOUSE 2
  Protein Cngb1 Cngb1 Q91WA8_MOUSE 3
  Protein Cngb1 Cngb1 E9PXX0_MOUSE 2
  Protein Slc24a1 Slc24a1 Q91WD8_MOUSE 2
  Retinal-specific ATP-binding cassette transporter Abca4 ABCA4_MOUSE 19
  Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 Atp2a2 AT2A2_MOUSE 6
  Sideroflexin-1 Sfxn1 SFXN1_MOUSE 3
  Sideroflexin-3 Sfxn3 SFXN3_MOUSE 4
  Sideroflexin-5 Sfxn5 SFXN5_MOUSE 3
  Sodium- and chloride-dependent GABA transporter 1 Slc6a1 SC6A1_MOUSE 3
  Sodium- and chloride-dependent GABA transporter 3 Slc6a11 S6A11_MOUSE 4
  Sodium/potassium-transporting ATPase subunit beta-1 Atp1b1 AT1 B1_MOUSE 8
  Sodium/potassium-transporting ATPase subunit beta-2 Atp1b2 AT1B2_MOUSE 9
  Sodium/potassium-transporting ATPase subunit beta-3 Atp1b3 AT1B3_MOUSE 4
  Sodium-coupled neutral amino acid transporter 3 Slc38a3 S38A3_MOUSE 2
  Vesicular glutamate transporter 1 Slc17a7 VGLU1_MOUSE 2
  Voltage-dependent anion-selective channel protein 3 Vdac3 VDAC3_MOUSE 7
Lipid Transport/Synthesis/Metabolism
  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Agpat3 PLCC_MOUSE 2
  3-hydroxyacyl-CoA dehydrogenase type-2 Hsd17b10 HCD2_MOUSE 2
  3-ketoacyl-CoA thiolase A, peroxisomal Acaa1a THIKA_MOUSE 4
  Acyl-CoA dehydrogenase family member 9, mitochondrial Acad9 ACAD9 MOUSE 3
  Enoyl-CoA delta isomerase 1, mitochondrial Eci1 ECI1_MOUSE 4
  Estradiol 17-beta-dehydrogenase 12 Hsd17b12 DHB12_MOUSE 2
  Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial Hadh HCDH_MOUSE 3
  Inorganic pyrophosphatase 2, mitochondrial Ppa2 D3Z636_MOUSE 2
  Isoform 2 of Long-chain-fatty-acid–CoA ligase 6 Acsl6 ACSL6_MOUSE 6
  Long-chain fatty acid transport protein 1 Slc27a1 S27A1_MOUSE 2
  Long-chain specific acyl-CoA dehydrogenase, mitochondrial Acadl ACADL_MOUSE 2
  Medium-chain specific acyl-CoA dehydrogenase, mitochondrial Acadm ACADM_MOUSE 4
  Neutral cholesterol ester hydrolase 1 Nceh1 NCEH1_MOUSE 2
  Trifunctional enzyme subunit alpha, mitochondrial Hadha ECHA_MOUSE 5
  Trifunctional enzyme subunit beta, mitochondrial Hadhb ECHB_MOUSE 3
  Very long-chain specific acyl-CoA dehydrogenase, mitochondrial Acadvl ACADV_MOUSE 2
  Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 3 ptplad1 HACD3_MOUSE 2
Neurotransmitter Regulation and Synthesis
  4-trimethylaminobutyraldehyde dehydrogenase
Aldh9a1 AL9A1_MOUSE 2
  Glutamate decarboxylase 1 Gad1 DCE1_MOUSE 2
  Glutaminase kidney isoform, mitochondrial Gls GLSK_MOUSE 10
  Isoform 2 of 4-aminobutyrate aminotransferase, mitochondrial Abat GABT_MOUSE 7
  Succinate-semialdehyde dehydrogenase, mitochondrial Aldh5a1 SSDH_MOUSE 5
Oxidation/Reduction
  Alcohol dehydrogenase class-3
Adh5 ADHX_MOUSE 2
  Aldehyde dehydrogenase, mitochondrial Aldh2 ALDH2_MOUSE 4
  Biliverdin reductase A Blvra BIEA_MOUSE 2
  Carbonyl reductase [NADPH] 3 Cbr3 CBR3_MOUSE 2
  D-beta-hydroxybutyrate dehydrogenase, mitochondrial Bdh1 BDH_MOUSE 2
  Glutathione peroxidase Gpx4 GPX41_MOUSE 2
  Isoform 2 of Alpha-aminoadipic semialdehyde dehydrogenase Aldh7a1 AL7A1_MOUSE 2
  Isoform 4 of Oxidation resistance protein 1 Oxr1 OXR1_MOUSE 5
  NAD-dependent malic enzyme, mitochondrial Me2 MAOM_MOUSE 4
  NADPH–cytochrome P450 reductase Por NCPR_MOUSE 3
  Retinol dehydrogenase 12 Rdh12 RDH12_MOUSE 9
  Saccharopine dehydrogenase-like oxidoreductase Sccpdh SCPDL_MOUSE 2
  Serum paraoxonase/arylesterase 1 Pon1 PON1_MOUSE 2
  Superoxide dismutase [Mn], mitochondrial Sod2 SODM_MOUSE 7
  Thioredoxin-dependent peroxide reductase, mitochondrial Prdx3 PRDX3_MOUSE 2
  Thioredoxin-related transmembrane protein 1 Tmx1 TMX1_MOUSE 2
  Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase
Phospholipid Transport
Dhdh DHDH_MOUSE 2
  Phosphatidylinositol transfer protein alpha isoform Pitpna PIPNA_MOUSE 2
Protein Synthesis
  40S ribosomal protein S10
Rps10 RS10_MOUSE 3
  40S ribosomal protein S20 Rps20 RS20_MOUSE 2
  40S ribosomal protein S26 Rps26 RS26_MOUSE 2
  60S acidic ribosomal protein P2 Rplp2 RLA2_MOUSE 4
  60S ribosomal protein L31 Rpl31 RL31_MOUSE 2
  ATP-dependent RNA helicase A Dhx9 E9QNN1_MOUSE 6
  ATP-dependent RNA helicase DDX19A Ddx19a DD19A_MOUSE 2
  Elongation factor Tu, mitochondrial Tufm EFTU_MOUSE 5
  Eukaryotic initiation factor 4A-III Eif4a3 IF4A3_MOUSE 2
  Eukaryotic translation initiation factor 2 subunit 1 Eif2s1 IF2A_MOUSE 3
ProteinTransport
  AP-1 complex subunit beta-1
Ap1b1 AP1B1_MOUSE 9
  AP-3 complex subunit beta-2 Ap3b2 AP3B2_MOUSE 3
  Coatomer subunit beta’ Copb2 COPB2_MOUSE 3
  Conserved oligomeric Golgi complex subunit 3 Cog3 COG3_MOUSE 2
  Cytoplasmic dynein 1 intermediate chain 2 Dync1i2 A2BFF5_MOUSE 4
  Disks large homolog 1 Dlg1 E9Q9H0_MOUSE 3
  Endoplasmic reticulum-Golgi intermediate compartment protein 1 Ergic1 ERGI1_MOUSE 2
  Erlin-2 Erlin2 ERLN2_MOUSE 2
  Exportin-1 Xpo1 XPO1_MOUSE 4
  Importin-5 Ipo5 IPO5_MOUSE 3
  Isoform 2 of MAGUK p55 subfamily member 2 Mpp2 MPP2_MOUSE 7
  Isoform 2 of TOM1-like protein 2 Tom1l2 TM1L2_MOUSE 2
  Isoform B of AP-2 complex subunit alpha-1 Ap2a1 AP2A1_MOUSE 2
  Kinectin Ktn1 F8VQC7_MOUSE 2
  Mitochondrial import inner membrane translocase subunit TIM50 Timm50 TIM50_MOUSE 2
  Mitochondrial import receptor subunit TOM70 Tomm70a TOM70_MOUSE 3
  Nuclear transport factor 2 Nutf2 NTF2_MOUSE 2
  PRA1 family protein 2 Praf2 PRAF2 MOUSE 2
  PRA1 family protein 3 Arl6ip5 PRAF3_MOUSE 2
  Protein ERGIC-53 Lman1 LMAN1_MOUSE 5
  Protein MGARP (Fragment) Mgarp D3Z134_MOUSE 2
  Protein transport protein Sec23A Sec23a E9Q1S3_MOUSE 2
  Transmembrane emp24 domain-containing protein 10 Tmed10 TMEDA_MOUSE 2
  Transportin-1 (Fragment) Tnpo1 Q3TKD0_MOUSE 4
Proteosome Degradation/Protease
  26S proteasome non-ATPase regulatory subunit 11
Psmd11 PSD11_MOUSE 2
  26S proteasome non-ATPase regulatory subunit 2 Psmd2 PSMD2 MOUSE 5
  Cathepsin B Ctsb CATB_MOUSE 2
  Cathepsin D (Fragment) Ctsd F6Y6L6_MOUSE 4
  Dipeptidyl peptidase 3 Dpp3 DPP3_MOUSE 4
  E3 ubiquitin-protein ligase NEDD4 Nedd4 NEDD4_MOUSE 4
  Isoform 2 of Protein phosphatase 1H Ppm1h PPM1H_MOUSE 2
  Proteasome subunit alpha type-4 Psma4 PSA4_MOUSE 2
  Proteasome subunit beta type-2 Psmb2 PSB2_MOUSE 3
  Proteasome subunit beta type-3 Psmb3 PSB3 MOUSE 2
  Protein DDI1 homolog 2 Ddi2 DDI2_MOUSE 2
  Ubiquilin-2 Ubqln2 UBQL2_MOUSE 3
  Ubiquitin carboxyl-terminal hydrolase Usp7 UBP7_MOUSE 4
  Ubiquitin thioesterase OTUB1 Otub1 OTUB1_MOUSE 6
RNA Metabolism
  60 kDa SS-A/Ro ribonucleoprotein
Trove2 RO60_MOUSE 2
  Aspartate–tRNA ligase, cytoplasmic Dars SYDC_MOUSE 3
  CCA tRNA nucleotidyltransferase 1, mitochondrial Trnt1 TRNT1_MOUSE 3
  Glycine–tRNA ligase Gars SYG_MOUSE 3
  Heterogeneous nuclear ribonucleoprotein H2 Hnrnph2 HNRH2_MOUSE 2
  Heterogeneous nuclear ribonucleoprotein U-like protein 2 Hnrnpul2 HNRL2_MOUSE 2
  Isoleucine–tRNA ligase, mitochondrial Iars2 SYIM_MOUSE 2
  Poly(rC)-binding protein 4 Pcbp4 PCBP4_MOUSE 2
  Pre-mRNA-processing-splicing factor 8 Prpf8 PRP8_MOUSE 2
  Probable ATP-dependent RNA helicase DDX6 Ddx6 DDX6_MOUSE 3
  Probable C->U-editing enzyme APOBEC-2 Apobec2 ABEC2_MOUSE 2
  Ribonuclease inhibitor Rnh1 RINI_MOUSE 3
  RNA-binding protein 14 Rbm14 RBM14_MOUSE 2
  Small nuclear ribonucleoprotein-associated protein B Snrpb RSMB_MOUSE 2
  Splicing factor U2AF 35 kDa subunit
Signal Transduction
U2af1 U2AF1_MOUSE 2
  Diacylglycerol kinase epsilon Dgke DGKE_MOUSE 2
  G protein-coupled receptor kinase 1 Grk1 RK_MOUSE 14
  GTP-binding protein Di-Ras2 Diras2 DIRA2_MOUSE 2
  Guanine nucleotide-binding protein G(i) subunit alpha-2 Gnai2 GNAI2_MOUSE 4
  Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 Gnb3 GBB3_MOUSE 2
  Guanine nucleotide-binding protein G(q) subunit alpha Gnaq GNAQ_MOUSE 7
  Guanine nucleotide-binding protein G(s) subunit alpha isoforms short Gnas GNAS2_MOUSE 3
  Guanine nucleotide-binding protein G(t) subunit alpha-2 Gnat2 GNAT2_MOUSE 4
  Guanine nucleotide-binding protein G(z) subunit alpha Gnaz GNAZ_MOUSE 4
  Guanine nucleotide-binding protein subunit alpha-14 Gna14 GNA14_MOUSE 3
  Guanine nucleotide-binding protein subunit beta-2-like 1 Gnb2l1 GBLP_MOUSE 3
  Guanylyl cyclase GC-E Gucy2e GUC2E_MOUSE 15
  Isoform 1 of Regulator of G-protein signaling 9 Rgs9 RGS9_MOUSE 11
  Isoform 2 of Guanine nucleotide-binding protein subunit beta-5 Gnb5 GBB5_MOUSE 3
  Isoform 2 of Neurochondrin Ncdn NCDN_MOUSE 2
  Phosphodiesterase 6A, cGMP-specific, rod, alpha Pde6a Q8K0A8_MOUSE 26
  Protein Rap1gap Rap1gap A2ALS5_MOUSE 2
  Ras-related protein Rab-10 Rab10 RAB10_MOUSE 2
  Ras-related protein Rab-11B Rab11b RB11B_MOUSE 4
  Ras-related protein Rab-18 Rab18 RAB18_MOUSE 2
  Ras-related protein Rab-1B Rab1b RAB1B_MOUSE 3
  Ras-related protein Rab-3C Rab3c RAB3C_MOUSE 3
  Ras-related protein Rab-5A Rab5a RAB5A_MOUSE 3
  Ras-related protein Rab-5B Rab5b RAB5B_MOUSE 3
  Ras-related protein Rab-5C Rab5c RAB5C_MOUSE 2
  Ras-related protein Rab-6B Rab6b RAB6B_MOUSE 3
  Ras-related protein Rap-1A Rap1a RAP1A_MOUSE 3
  Regulator of G-protein signaling 9-binding protein Rgs9bp R9BP_MOUSE 3
  Rho GTPase-activating protein 1 Arhgap1 A2AH25_MOUSE 6
  Rod cGMP-specific 3′,5′-cyclic phosphodiesterase subunit beta Pde6b PDE6B_MOUSE 10
  Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform Ppp2r2a 2ABA_MOUSE 3
  Short-wave-sensitive opsin 1
Stress Response
Opn1sw OPSB_MOUSE 2
  Constitutive coactivator of PPAR-gamma-like protein 1 FAM120A F120A_MOUSE 2
  Heat shock 70 kDa protein 12A Hspa12a HS12A_MOUSE 6
  Hypoxia up-regulated protein 1 Hyou1 HYOU1_MOUSE 6
Synaptic Transmission
  Isoform 2 of Solute carrier family 12 member 5
Slc12a5 S12A5_MOUSE 16
  Protein lin-7 homolog A Lin7a LIN7A_MOUSE 4
  Synaptic vesicle glycoprotein 2B Sv2b SV2B_MOUSE 4
  Synaptic vesicle membrane protein VAT-1 homolog-like Vat1l VAT1L_MOUSE 2
  Synaptoporin Synpr SYNPR_MOUSE 4
  Syntaxin-1B Stx1b STX1 B_MOUSE 10
  Vesicle-associated membrane protein-associated protein A
Transcription Regulation
Vapa VAPA_MOUSE 5
  Alpha/beta hydrolase domain-containing protein 14B Abhd14b E9QN99_MOUSE 2
  Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial Chchd3 CHCH3_MOUSE 3
  Isoform 2 of Mitochondrial inner membrane protein Immt IMMT_MOUSE 19
  Isoform Epsilon of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma Tmpo LAP2B_MOUSE 7
  Protein arginine N-methyltransferase 1 Prmt1 ANM1_MOUSE 2
  Transcription elongation factor B polypeptide 2
Transferase
Tceb2 ELOB_MOUSE 2
  Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial Dlst ODO2_MOUSE 4
  Farnesyl pyrophosphate synthase Fdps FPPS_MOUSE 4
  Isoform 2 of NAD kinase 2, mitochondrial Nadk2 NAKD2 MOUSE 2
  Ornithine aminotransferase, mitochondrial Oat OAT_MOUSE 5
  Phosphoserine aminotransferase Psat1 SERC_MOUSE 4
  Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial
Vesicle Transport
Oxct1 SCOT1_MOUSE 12
  Protein NipSnap homolog 2 Gbas NIPS2_MOUSE 3
  Protein Sptbn2
Others
Sptbn2 Q68FG2_MOUSE 3
  Adipocyte plasma membrane-associated protein Apmap APMAP_MOUSE 2
  C2 domain-containing protein 2-like C2cd2l C2C2L_MOUSE 4
  Ceruloplasmin Cp CERU_MOUSE 2
  COP9 signalosome complex subunit 1 Gps1 G3UXW9_MOUSE 4
  Delta-aminolevulinic acid dehydratase Alad HEM2_MOUSE 2
  DmX-like protein 2 Dmxl2 DMXL2_MOUSE 4
  Endophilin-B2 Sh3glb2 SHLB2_MOUSE 2
  EPM2A-interacting protein 1 Epm2aip1 EPMIP_MOUSE 3
  ES1 protein homolog, mitochondrial D10Jhu81e ES1_MOUSE 3
  Galectin-related protein Lgalsl LEGL_MOUSE 4
  Gamma-crystallin A Cryga CRGA_MOUSE 2
  Golgi apparatus protein 1 (Fragment) Glg1 GSLG1_MOUSE 2
  Golgi reassembly stacking protein 2, isoform CRA_d Gorasp2 GORS2_MOUSE 3
  Isochorismatase domain-containing protein 2A, mitochondrial Isoc2a ISC2A_MOUSE 2
  LanC-like protein 2 Lancl2 LANC2_MOUSE 2
  Leucine-rich repeat-containing protein 59 Lrrc59 LRC59_MOUSE 3
  Low molecular weight phosphotyrosine protein phosphatase Acp1 PPAC_MOUSE 2
  MCG140784 Try10 Q792Z1_MOUSE 2
  NAD(P)H-hydrate epimerase Apoa1bp NNRE_MOUSE 2
  PEX5-related protein Pex5l D3YYH0_MOUSE 2
  Phosphoribosyl pyrophosphate synthase-associated protein 2 Prpsap2 KPRB_MOUSE 2
  Protein Ahnak2 (Fragment) Ahnak2 F7DBB3_MOUSE 3
  Protein NDRG3 Ndrg3 NDRG3_MOUSE 2
  Protein SET (Fragment) Set SET_MOUSE 2
  Tumor protein D52 (Fragment) Tpd52 D3Z125_MOUSE 2
  Uncharacterized protein Tubb4b-ps1 J3QNR5_MOUSE 2
  Up-regulated during skeletal muscle growth protein 5 Usmg5 USMG5_MOUSE 2