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. 2015 Sep 21;2:150052. doi: 10.1038/sdata.2015.52

Table 1. Stacked image data for the 16-bit quality unfiltered sediment core volumes (n=20).

Core_ID Scan_ID Replicate_ID Species_ID dimension_X dimension_y dimension_Z number_of_images species_id_folder stack_folder imagestack_fileprefix first_image last_image
34 1 Rep_01 Corophium volutator 2000 2000 2000 2000 Species_Corophium Core_Volume_01_CV01_16bit Core_Volume_01_CV01_16bit_2000_2000_2000_ Core_Volume_01_CV01_16bit_2000_2000_2000_0000.tif Core_Volume_01_CV01_16bit_2000_2000_2000_1999.tif
24 2 Rep_01 Hediste diversicolor 2000 2000 2000 2000 Species_Hediste Core_Volume_02_HD01_16bit Core_Volume_02_HD01_16bit_2000_2000_2000_ Core_Volume_02_HD01_16bit_2000_2000_2000_0000.tif Core_Volume_02_HD01_16bit_2000_2000_2000_1999.tif
39 3 Rep_01 Mixed species 2000 2000 2000 2000 Species_Mixed Core_Volume_03_Mx01_16bit Core_Volume_03_Mx01_16bit_2000_2000_2000_ Core_Volume_03_Mx01_16bit_2000_2000_2000_0000.tif Core_Volume_03_Mx01_16bit_2000_2000_2000_1999.tif
29 4 Rep_01 Hydrobia ulvae 2000 2000 2000 2000 Species_Hydrobia Core_Volume_04_HU01_16bit Core_Volume_04_HU01_16bit_2000_2000_2000_ Core_Volume_04_HU01_16bit_2000_2000_2000_0000.tif Core_Volume_04_HU01_16bit_2000_2000_2000_1999.tif
40 5 Rep_02 Mixed species 2000 2000 2000 2000 Species_Mixed Core_Volume_05_Mx02_16bit Core_Volume_05_Mx02_16bit_2000_2000_2000_ Core_Volume_05_Mx02_16bit_2000_2000_2000_0000.tif Core_Volume_05_Mx02_16bit_2000_2000_2000_1999.tif
23 6 Rep_02 Hediste diversicolor 2000 2000 2000 2000 Species_Hediste Core_Volume_06_HD02_16bit Core_Volume_06_HD02_16bit_2000_2000_2000_ Core_Volume_06_HD02_16bit_2000_2000_2000_0000.tif Core_Volume_06_HD02_16bit_2000_2000_2000_1999.tif
36 7 Rep_03 Mixed species 2000 2000 2000 2000 Species_Mixed Core_Volume_07_Mx03_16bit Core_Volume_07_Mx03_16bit_2000_2000_2000_ Core_Volume_07_Mx03_16bit_2000_2000_2000_0000.tif Core_Volume_07_Mx03_16bit_2000_2000_2000_1999.tif
31 8 Rep_02 Corophium volutator 2000 2000 2000 2000 Species_Corophium Core_Volume_08_CV02_16bit Core_Volume_08_CV02_16bit_2000_2000_2000_ Core_Volume_08_CV02_16bit_2000_2000_2000_0000.tif Core_Volume_08_CV02_16bit_2000_2000_2000_1999.tif
30 9 Rep_02 Hydrobia ulvae 2000 2000 2000 2000 Species_Hydrobia Core_Volume_09_HU02_16bit Core_Volume_09_HU02_16bit_2000_2000_2000_ Core_Volume_09_HU02_16bit_2000_2000_2000_0000.tif Core_Volume_09_HU02_16bit_2000_2000_2000_1999.tif
25 10 Rep_03 Hediste diversicolor 2000 2000 2000 2000 Species_Hediste Core_Volume_10_HD03_16bit Core_Volume_10_HD03_16bit_2000_2000_2000_ Core_Volume_10_HD03_16bit_2000_2000_2000_0000.tif Core_Volume_10_HD03_16bit_2000_2000_2000_1999.tif
28 11 Rep_03 Hydrobia ulvae 2000 2000 2000 2000 Species_Hydrobia Core_Volume_11_HU03_16bit Core_Volume_11_HU03_16bit_2000_2000_2000_ Core_Volume_11_HU03_16bit_2000_2000_2000_0000.tif Core_Volume_11_HU03_16bit_2000_2000_2000_1999.tif
38 12 Rep_04 Mixed species 2000 2000 2000 2000 Species_Mixed Core_Volume_12_Mx04_16bit Core_Volume_12_Mx04_16bit_2000_2000_2000_ Core_Volume_12_Mx04_16bit_2000_2000_2000_0000.tif Core_Volume_12_Mx04_16bit_2000_2000_2000_1999.tif
22 13 Rep_04 Hediste diversicolor 2000 2000 2000 2000 Species_Hediste Core_Volume_13_HD04_16bit Core_Volume_13_HD04_16bit_2000_2000_2000_ Core_Volume_13_HD04_16bit_2000_2000_2000_0000.tif Core_Volume_13_HD04_16bit_2000_2000_2000_1999.tif
27 14 Rep_04 Hydrobia ulvae 2000 2000 2000 2000 Species_Hydrobia Core_Volume_14_HU04_16bit Core_Volume_14_HU04_16bit_2000_2000_2000_ Core_Volume_14_HU04_16bit_2000_2000_2000_0000.tif Core_Volume_14_HU04_16bit_2000_2000_2000_1999.tif
35 15 Rep_03 Corophium volutator 2000 2000 2000 2000 Species_Corophium Core_Volume_15_CV03_16bit Core_Volume_15_CV03_16bit_2000_2000_2000_ Core_Volume_15_CV03_16bit_2000_2000_2000_0000.tif Core_Volume_15_CV03_16bit_2000_2000_2000_1999.tif
32 16 Rep_04 Corophium volutator 2000 2000 2000 2000 Species_Corophium Core_Volume_16_CV04_16bit Core_Volume_16_CV04_16bit_2000_2000_2000_ Core_Volume_16_CV04_16bit_2000_2000_2000_0000.tif Core_Volume_16_CV04_16bit_2000_2000_2000_1999.tif
37 17 Rep_05 Mixed species 2000 2000 2000 2000 Species_Mixed Core_Volume_17_Mx05_16bit Core_Volume_17_Mx05_16bit_2000_2000_2000_ Core_Volume_17_Mx05_16bit_2000_2000_2000_0000.tif Core_Volume_17_Mx05_16bit_2000_2000_2000_1999.tif
33 18 Rep_05 Corophium volutator 2000 2000 2000 2000 Species_Corophium Core_Volume_18_CV05_16bit Core_Volume_18_CV05_16bit_2000_2000_2000_ Core_Volume_18_CV05_16bit_2000_2000_2000_0000.tif Core_Volume_18_CV05_16bit_2000_2000_2000_1999.tif
26 19 Rep_05 Hydrobia ulvae 2000 2000 2000 2000 Species_Hydrobia Core_Volume_19_HU05_16bit Core_Volume_19_HU05_16bit_2000_2000_2000_ Core_Volume_19_HU05_16bit_2000_2000_2000_0000.tif Core_Volume_19_HU05_16bit_2000_2000_2000_1999.tif
21 20 Rep_05 Hediste diversicolor 2000 2000 2000 2000 Species_Hediste Core_Volume_20_HD05_16bit Core_Volume_20_HD05_16bit_2000_2000_2000_ Core_Volume_20_HD05_16bit_2000_2000_2000_0000.tif Core_Volume_20_HD05_16bit_2000_2000_2000_1999.tif