Skip to main content
. 2015 Aug 31;112(37):E5142–E5149. doi: 10.1073/pnas.1507726112

Table S2.

Kinetic data for displacement of Sp1 ZF-DBD by Egr-1 ZF-DBDs

Egr-1 ZF-DBD kdisp (s−1)* kdisp/koff,Sp1 kdisp/Aen, M−1 s−1
Type 1 0.17 ± 0.04 15 ± 4 (0.7 ± 0.1) × 106
Type 0 0.09 ± 0.01 9 ± 1 (1.4 ± 0.3) × 106
Type 2 0.13 ± 0.01 12 ± 1 (2.2 ± 0.2) × 106
Type 3 0.18 ± 0.01 16 ± 2 (3.2 ± 0.3) × 106
*

Values of the first-order rate constant for displacement kdisp were obtained from the data shown in Fig. 5B via nonlinear least-squares fitting with kobs = kdisp Ptot/(Aen + Ptot), where Ptot represents a total concentration of Egr-1 ZF-DBD, and Aen represents an apparent steady-state constant for the encounter complex.

The parameter koff,Sp1 represents the rate constant for Sp1 ZF-DBD’s spontaneous dissociation from the overlapping target site (Fig. S6). The ratio kdisp/koff,Sp1 corresponds to enhancement of Sp1 ZF-DBD’s dissociation by Egr-1 ZF-DBD.

This corresponds to the second-order rate constant for the overall process at relatively low concentrations of Egr-1 ZF-DBD (i.e., Ptot << Aen).