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. 2015 Aug 3;112(37):11547–11552. doi: 10.1073/pnas.1500964112

Table S2.

HygX data collection and refinement statistics

HygX-apo HygX-Fe HygX-AKG HygX-AKG-hygB HygX-AKG Ni-SAD
Data collection
 PDB ID code 4XC9 4ZPI 4XCA 4XCB
 Space group P21212 P212121 P212121 P212121 P212121
 Cell dimensions
a, b, c (Å) 112.1, 274.4, 52.8 54.4, 109.0, 221.6 53.4, 112.0, 177.8 50.3, 117.5, 185.7 53.5, 112.1, 178.2
 α, β, γ (°) 90, 90, 90 90, 90, 90 90, 90, 90 90, 90, 90 90, 90, 90
 Wavelength, Å 0.979 1.739 0.979 0.979 1.485
 APS Beamline 21-ID-F 21-ID-D 21-ID-F 21-ID-F 21-ID-D
 Resolution, Å 2.4 2.5 2.30 1.60 2.95
Rsym, % 8.0 (44.3) 9.4 (58.4) 7.1 (23.4) 7.5 (44.6) 10.5 (33.0)
II 14.7 (2.4) 18.8 (2.2) 21.1 (6.8) 20.0 (3.3) 27.3 (9.0)
 Completeness, % 92.9 (91.1) 87.8 (89.8) 96.1 (97.8) 93.8 (92.8) 99.5 (99.9)
 Redundancy 3.7 (3.6) 3.7 (3.3) 4.4 (4.4) 4.9 (4.4) 7.3 (7.5)
Refinement
 Resolution, Å 2.4 2.5 2.3 1.6 NA
 No. of reflections 61,588 149,043 46,643 126,897
Rwork/Rfree 18.4/24.6 17.1/22.4 17.6/23.6 22.2/25.3
 No. of atoms
 Protein 11732 7851 7985 8160
 Ligand/ion 48 28 55 188
 Water 498 140 554 578
 B-factors
 Protein 40.7 39.5 30.6 22.2
 Ligand/ion 49.9 56.6 37.5 20.2
 Water 38.7 34.8 33.1 25.5
 Ramachandran
 Favored, % 96.7 96.7 97.6 97.8
 Allowed, % 3.2 3.3 2.3 2.2
 Outliers, % 0.1 0.0 0.1 0.0
 rms deviations
 Bond lengths, Å 0.008 0.008 0.008 0.006
 Bond angles, ° 1.12 1.11 1.09 1.07

All datasets were collected from a single crystal. Values in parentheses are for data in the highest-resolution shell. The HygX-AKG Ni-SAD dataset was used only for phasing. hygB, hygromycin B; NA, not applicable.