Table I. List of Arabidopsis genes regulated by both AvrE and HopM1 during Pst DC3000 infection.

For log₂ fold change, down-regulated genes are indicated by the minus symbol and up-regulated genes are indicated by the plus symbol. Log₂ fold change indicates the gene expression change caused by AvrE (by comparison between hopM1 and avrE hopM1 strains) or HopM1 (by comparison between avrE and avrE hopM1 strains). P < 0.1; log₂ > 1 or < −1.

Gene Annotation	Gene Identifier	Log2 Fold Change				PM
		AvrE	P	HopM1	P
Universal stress protein (USP) family protein	AT3G62550	−1.973	0.010	−1.933	0.045
NDR1/HIN1-LIKE13; NHL13	AT2G27080	−1.947	0.006	−2.048	0.044	Yes
Unknown protein	AT5G11070	−1.654	0.005	−1.503	0.006
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein	AT3G26510	−1.500	0.026	−1.072	0.019
Arabinogalactan protein20; AGP20	AT3G61640	−1.459	0.059	−1.655	0.044	Yes
Plasma-membrane associated cation-binding protein1; PCAP1	AT4G20260	−1.219	0.050	−1.125	0.053	Yes
Cys-rich receptor-like kinase10	AT4G23180	−1.166	0.075	−1.004	0.071	Yes
Calcineurin B-like-interacting protein kinase9	AT1G01140	−1.042	0.038	−1.072	0.020
Glutathione S-transferase24; GSTU6	AT2G29440	+2.206	0.048	+1.604	0.062
NAC (for no apical meristem [NAM], Arabidopsis transcription activation factor [ATAF], cup-shaped cotyledon [CUC]) domain-containing protein25	AT1G61110	+1.509	0.064	+1.031	0.088
Xyloglucan endotransglycosylase-related8; XTR8	AT3G44990	+1.025	0.020	+1.290	0.049