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. Author manuscript; available in PMC: 2015 Sep 22.
Published in final edited form as: Methods Mol Biol. 2015;1268:43–66. doi: 10.1007/978-1-4939-2285-7_3

Table 9.

A universal classification of antimicrobial peptides

Class Chain
linkage
Subclass Link type Class
symbol
Examples
I Linear &
open
chainsa
1. One chain None UCLL1a LL-37, magainins
2. Two chains None UCLL2 Enterocin L50
II Sidechain-
Sidechain
1. One chain Cβ-S-S-Cβ
(Disulfide-
bond)
UCSS1aa Defensin-like
Cβ-S-Cβ
(thioether)
UCSS1ba lantibiotics
2. Two chains Inter-chain
Cβ-S-S-Cβ
UCSS2a Distinctin,
halocidin, centrocin
Intra-chain
Cβ-S-Cβ
UCSS2b Lacticin-3147, Smb
III Sidechain-
Backbone
One chain CO-NH
amide
UCSB1a Microcin J25,
Lariatins
CO-O ester UCSB1b Fusaricidin A
Cβ-S-Cα UCSB1c Thuricin CD
IV Backbone-
Backbone
One chain CO-NH
amide
UCBB1aa AS-48, subtilosin
A, cyclotides, θ-
defenins
a

Further classifications are provided in Tables 10-13.