Table 4.
Fimbrial gene clusters found in PCN033 and PCN061
Typeα | Cluster location in PCN033 | Cluster location in PCN061 | |
---|---|---|---|
α | Mat(Ecp) | PCN033_0333-0338a | - |
γ1 | Smf | PCN033_0593-0597a | PCN061_0579-0584a |
Ycb | PCN033_1033-1039a | PCN061_0970-0976a | |
F9 | PCN033_1642-1647a | PCN061_1484-1486 | |
Type I | PCN033_4812-4820a | PCN061_4498-4505a | |
Yra | - | PCN061_3232-3235a | |
γ4 | Yeh | PCN033_2280-2283a | PCN061_2192-2195a |
Yeh-like | PCN033_0019-0021a | PCN061_0022 | |
Yad | PCN033_0142-0148a | PCN061_0136 | |
Mrk(Type III) | - | PCN061p6_067-071a | |
π | Ybg | PCN033_0733-0736a | PCN061_0735-0742 |
Yfc | PCN033_2517-2522 | PCN061_2433-2438a | |
Yqi | PCN033_3368-3372a | PCN061_3092-3094a | |
κ | K99 | PCN033_4573 | - |
Curlin | PCN033_1119-1126a | - | |
Type IV | - | PCN061p5_124-133a |
Typeα based on Wurpel et al. [46] and Nuccio and Baumler [45]
“-” indicates the fimbrial gene clusters are absent
aFimbrial gene clusters are intact