Skip to main content
. Author manuscript; available in PMC: 2016 Oct 1.
Published in final edited form as: Hum Genet. 2015 Jul 24;134(10):1055–1068. doi: 10.1007/s00439-015-1585-y

Table 3.

Variant counts after sequential stages of filtering

Stage of Filtering
1) Linkage 2) Frequency* & Function** 3a) Imputation & Association*** 3b) Mendelian Pattern
AU119 185 4 2 1
AU625 504 8 1 3
AU366 420 20 1 2
AU071 1,124 40 1 18
AU754 1,129 43 9 12
AU599 1,229 32 9 11
AU113 1,610 53 5 23
Total 6,201 200 28 70
*

frequency of variant alleles less than or equal to 0.05 in 1KGP-EUR

**

synonymous or intergenic regions excluded

***

p-value less than or equal to 0.05