TABLE 2.
Antibacterial activity of M. capitata-associated bacteria
| Isolate | Closest match in GenBank |
Matching OTUb (no. of aligned bp) | Isolate inhibiteda |
||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Organism | Accession no. | H2 | H16 | H17 | H18 | H38 | H39 | H43 | H206 | H217 | H223 | H236 | H254 | H269 | H276 | H282 | H291 | OCN002 | OCN008 | ||
| H2 | Psychrobacter celer | FJ613610.1 | 439 (195) | + | |||||||||||||||||
| H16 | Erythrobacter sp. | HG008905.1 | 1836 (169) | ||||||||||||||||||
| H17 | Kocuria rosea | EU660350.1 | 2265 (159) | ||||||||||||||||||
| H18 | Micrococcus luteus | AB697159.1 | 1998 (174) | + | + | ||||||||||||||||
| H38 | Microbulbifer variabilis | JN128259.1 | 143 (195) | + | + | + | + | ||||||||||||||
| H39 | Pseudovibrio sp. | KC429855.1 | 1188 (169) | + | |||||||||||||||||
| H43 | Ruegeria sp. | HQ908677.1 | 1115 (169) | ||||||||||||||||||
| H206 | Ferrimonas balearica | JQ799133.1 | NA | + | + | + | + | ||||||||||||||
| H217 | Psychrobacter piscidermidis | EU127295.1 | 65 (195) | + | + | + | + | + | |||||||||||||
| H223 | Lysinibacillus fusiformis | JN416567.1 | 1572 (195) | + | |||||||||||||||||
| H236 | Chromohalobacter sp. | HQ683730.1 | 1348 (178) | ||||||||||||||||||
| H254 | Stenotrophomonas sp. | AM400231.1 | NA | ||||||||||||||||||
| H269 | Pseudomonas stutzeri | HF571099.1 | 696 (194) | ||||||||||||||||||
| H276 | Bacillus hwajinpoensis | JN208078.1 | 414 (195) | + | + | ||||||||||||||||
| H282 | Bacillus baekryungensis | JF721989.1 | 414 (195) | ||||||||||||||||||
| H291 | Pseudoalteromonas sp. | FJ981833.1 | 2063 (194) | ||||||||||||||||||
a
+ indicates growth inhibition at an OD600 of <0.05 after 16 h of incubation at 25°C.
b
Representative isolates that matched an OTU from high-throughput sequencing data with 100% identity. Numbers in parentheses represent the number of base pairs aligned between the 16S rRNA sequence of the isolate and the OTU sequence. NA, not applicable.