TABLE 3.

Fold change differences of non-Agaricus transcripts with significantly higher levels in infected mushrooms compared to noninfected mushrooms and with a fold change of >2^a

Microarray transcript ID	Microarray analysis (BIM vs control)	RT-qPCR analysis (fold change)
		BIM vs control	BIM vs WIM
2127	4,019	662,368	35,921
2135	3,702	65,873	16,621
2121	3,466	207,805	3,707
2120	2,787	618,604	31,640
2125	2,768	1,916,670	17,172
2008	2,649	2,106,633	11,525
2126	2,550	65,873	16,621
2019	1,727	1,427,255	87,515
2122	1,125	262,186	11,746
2129	148	265,049	3,468
2029	16.1	nm	nm
2123	12.3	nm	nm
2020	7.1	nm	nm
2011	6.3	nm	nm
2118	4.8	nm	nm
2015	4.5	nm	nm

^aFold change differences were determined by microarray analysis and RT-qPCR. BIM, brown infected mushrooms; control, noninfected white mushrooms; WIM, white infected mushrooms; nm, not measured.