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. 2015 Sep 22;15:641. doi: 10.1186/s12885-015-1650-x

Table 4.

Methylation frequency (%) of SFRP CpG islands at different cutaneous SCC pathological levels

Gene CpG Site Stage I Stage II Stage III H P-value
N x¯±s N x¯±s N x¯±s
SFRP1 CpG1_5 0 0.4012 ± 0.098 0 0.4521 ± 0.115 9 0.4952 ± 0.109 6.157 0.024*
CpG1_7 9 0.4011 ± 0.134 6 0.4811 ± 0.024 2 0.5121 ± 0.124 5.103 0.031
CpG2_1 7 0.4141 ± 0.19 0 0.4267 ± 0.314 2 0.4013 ± 0.217 2.136 0.021
CpG2_8 5 0.4231 ± 0.824 7 0.4501 ± 0.224 4 0.5011 ± 0.523 8.514 0.017
SFRP2 CpG1_5 44 0.3329 ± 0.101 29 0.3796 ± 0.170 19 0.4241 ± 0.183 6.142 0.015
CpG2_1 47 0.4094 ± 0.036 48 0.4367 ± 0.316 17 0.4713 ± 0.107 6.136 0.023
CpG2_3.4 55 0.4017 ± 0.098 42 0.4406 ± 0.194 18 0.4891 ± 0.153 5.218 0.015
SFRP4 CpG1_3 2 0.3029 ± 0.089 3 0.3496 ± 0.012 2 0.3867 ± 0.083 7.158 0.009
CpG2_2 9 0.2994 ± 0.037 2 0.3367 ± 0.016 5 0.4113 ± 0.086 7.156 0.023
SFRP5 CpG1_5 40 0.3014 ± 0.052 33 0.3834 ± 0.021 18 0.4345 ± 0.037 5.54 0.031
CpG2_1 32 0.2941 ± 0.098 19 0.3167 ± 0.314 34 0.4013 ± 0.057 3.136 0.021

N: number of samples; H: the Kruskal-Wallis H test

*p ≤ 0.05 indicates statistical significance