Table 1.

Datasets in this study

Dataset name	Total di-tags	Mapped di-tags	Percentre-ligation	Unique di-tags	Percentcis	Percenttrans	Percenthybrid
Mouse-1 ISL	255,402,369	173,621,670	2.17	123,691,456	34.7	65.3	0.02
Mouse-2 ISL	131,079,448	83,009,025	3.85	32,939,021	72.1	27.9	0.05
Human-1 ISL	31,550,241	19,444,276	5.61	11,128,672	41.3	58.7	0.08
Human-2 ISL	27,518,246	17,060,401	7.79	6,994,931	74.5	25.5	0.03
Mouse-human-1 ISL	40,398,555	22,667,233	3.16	17,137,291	38.2	61.8	11.9
Mouse-human-2 ISL	2,928,112	1,405,001	3.84	488,340	72.9	27.1	2.9
Mouse-1 INL	242,699,915	167,175,980	3.49	108,733,338	85.6	14.4	0.16
Mouse-2 INL	134,813,901	85,804,344	6.80	37,259,526	88.0	12.0	0.02
Human-1 INL	34,860,295	22,113,388	10.40	11,457,531	85.8	14.2	0.07
Human-2 INL	33,500,802	20,280,022	14.03	7,777,001	90.0	10.0	0.03
Mouse-human-1 INL	33,762,441	19,318,810	4.16	11,533,994	85.6	14.4	0.06
Mouse-human-2 INL	2,920,332	1,423,890	7.53	573,366	88.5	11.5	0.07
Mouse RL	36,268,145	25,581,886	9.25	4,920,447	7.1	92.9	-

INL in-nucleus ligation, ISL in-solution ligation, RL random ligation