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. 2015 Sep 23;10(9):e0139046. doi: 10.1371/journal.pone.0139046

Table 1. Model parameters.

Parameter description Notation Unit Value Reference
Optical and photosynthetic parameters
Background extinction σ bg m-1 0.06 This work
Extinction coefficient of semi-labile DOM σ sl m2 (mg C)-1 1 E-5 This work
Extin. coeff. of POM σ POM m2 (mg C)-1 1 E-4 [21]
Extin. coeff. of algal biomass σ P m2 (mg C)-1 4 E-4 [21]
Max. spec. photosynthetic rate r ass d-1 1.5 [21]
Max. Chl/C cell ratio θ max mg Chl (mg C)-1 0.02 [37]
Initial slope of PI-curve α mg C m2 (mg Chl W d)-1 2.5 This work
Photo-inhibition parameter β mg C m2 (mg Chl W d)-1 0.04 This work
Other algal parameters
Q10 parameter Q 10 - 2 [21]
Basal respiration rate r B.res d-1 0.01 This work
Minimum lysis rate r lys d-1 0.005 This work
Respired fraction of PP r A.res - 0.25 [21]
Fraction of excreted carbon p A.exu - 0.2 This work
Minimum N/C ratio Q Nmin mmol N (mg C)-1 0.003 This work
Redfield N/C ratio Q NRed mmol N (mg C)-1 7.862 E-4 [17]
Minimum P/C ratio Q Pmin mmol P (mg C)-1 1.5 E-4 This work
Redfield P/C ratio Q PRed mmol P (mg C)-1 1.26 E-2 [17]
Min. N/C ratio for Chl synthesis QNminchl mmol N (mg C)-1 0.00687 This work
Min. P/C ratio for Chl. Synthesis QPminchl mmol P (mg C)-1 4.288 E-4 This work
Affinity for NO3 - a N3 m3 (mg C)-1 d-1 0.01 This work
Affinity for NH4 + a N4 m3 (mg C)-1 d-1 0.01 This work
Affinity for PO4 3- a p m3 (mg C)-1 d-1 0.01 This work
N-stress threshold S N - 0.6 This work
P-stress threshold S P - 0.6 This work
N-threshold for max. uptake sNupt - 0.95 This work
P-threshold for max. uptake sPupt - 1.2 This work
N-stress threshold for chlorophyll synthesis sNchl - 0.95 This work
P-stress threshold for chlorophyll synthesis sPchl - 1.2 This work
N-stress threshold for respiration decrease sNres - 0.56 This work
P-stress threshold for respiration decrease sPres - 0.51 This work
Carbon fraction invested in basal toxin production Q Tmin - 0.001 This work
Maximum tox:C ratio Q Tmax - 0.003 This work
Carbon fraction invested in toxin production under nutrient stress φ d-1 0.0025 This work
Bacterial and organic matter parameters
Q10 parameter for bacteria Q 10B - 2 [21]
Max spec. uptake rate rassB d-1 4 [21]
Respired fraction of uptake rA.resB - 0.6 This work
Respired fraction of uptake under low oxygen rresoxB - 0.2 [21]
Basal respiration at 10°C rB.resB d-1 0.05 This work
Mortality rate rlysB d-1 0.05 [21]
Half saturation constant for oxygen limitation h ox - 0.312 [21]
Maximum N/C ratio QNmaxB mmol N (mg C)-1 0.017 [39]
Maximum P/C ratio QPmaxB mmol P (mg C)-1 0.0018 [39]
Half saturation constant for NH4 uptake h N mmol N m-3 0.5 [21]
Half saturation constant for PO4 uptake h p mmol P m-3 0.2 This work
Fraction of labile DOM derived from lysis and exudation r detr - 0.25 This work
Breakdown of semi-labile to labile DOM r dis d-1 0.01 This work
Toxin degradation rate t deg d-1 0.1 This work