Table 3. Identification of growth-related genes from the QTL region based on the genome assembly of Strongylocentrotus purpuratus.

					Gene annotation
Marker ID	LOD	Genetic position	Mapped genomic scaffolds	Genomic position of marker on scaffolds	Position	Accession	Gene name
133078	0.02	24.4	-	-	-	-	-
124053	2.4	25.4	-	-	-	-	-
45359	4.2	26.2	-	-	-	-	-
31192	1.9	30.3	Scaffold421	80647–80687	1006–3017	XP_003726225	Proteasome activator complex subunit 4
					21179–29139	XP_783430	NFX1-type zinc finger-containing protein 1-like
					37830–58904	XP_783383	NFX1-type zinc finger-containing protein 1-like
					85609–93035	XP_003726682	NFX1-type zinc finger-containing protein 1-like
					99281–128437	XP_003726678	NFX1-type zinc finger-containing protein 1-like
					145853–148655	XP_003727478	Voltage-gated hydrogen channel 1-like
					149713–153041	XP_003726679	Zinc finger protein 658B-like
					157428–167565	XP_781443	Protein BANP-like
					190574–196376	XP_003726680	Uncharacterized protein LOC100891444
					208034–217024	XP_799879	Uncharacterized protein LOC576126
					310244–321524	XP_003726681	Proteasome subunit alpha type-7-like
					324710–331936	XP_794275	Dihydroorotate dehydrogenase (quinone)
					333493–360838	XP_784540	Uncharacterized protein LOC579327
					388820–407045	XP_790027	Sodium-dependent noradrenaline transporter-like
					474481–492033	XP_002741679	Formin-F-like
325486	1.03	30.4	-	-	-	-	-
259227	0.78	32.7	Scaffold561	574803–574843	124–3647	XP_798750	WD repeat-containing protein 59-like
					4529–12228	XP_003728075	Uncharacterized protein LOC100894008
					20308–51667	XP_001176245	Uncharacterized protein LOC752684
					87888–107446	XP_003727353	Uncharacterized protein LOC100889609
					110037–127664	XP_003731558	Uncharacterized protein LOC100890838
					142285–145735	XP_792763	Partitioning defective 6 homolog beta-like
					157087–161272	XP_783156	Uncharacterized protein LOC577858
					162521–168812	XP_783224	NADH dehydrogenase flavoprotein 2
					174965–176710	XP_783290	Kelch-like protein 20-like
					177674–201677	XP_001176034	Nodulation protein nolNO-like
					220114–255066	XP_783602	Uncharacterized protein LOC578336
					343181–358582	XP_783839	Neuronal acetylcholine receptor subunit alpha-7-like
					365339–386511	XP_003728617	Protein unc-13 homolog C-like
					390211–396181	XP_003723955	Somatostatin receptor type 5-like
					401480–443047	NP_999656	Kinesin-like protein KIF15
					458464–469028	XP_003727352	Thyrotropin-releasing hormone receptor-like
					474600–477590	XP_783972	Thyrotropin-releasing hormone receptor-like
					592344–612852	XP_006814515	Uncharacterized protein LOC102809399
					641275–655077	XP_003727356	Uncharacterized protein LOC100890028