Table 3. RAD-seq results in parents and F2 populations using HiSeq2000 platform.
Samples | Number of reads | Number of RAD-tag | Mean coverage depth | Mean merged coverage depth |
---|---|---|---|---|
V. vexillata V1 | 442,165 | 412,372 | 12.0 | 12.7 |
V5 | 1,176,089 | 1,138,645 | 24.0 | 25.2 |
F2 populations (286 lines) | 470,584,049 | 450,040,150 | - | - |
Average per F2 individual | 1,670,491 | 1,597,514.3 | 30.6 | 37.0 |