Table 1. Primers for characterization of variable tandem repeats in four loci of the genome of 'Ca. Liberibacter asiaticus' strains.
Motif | Sequence | Genome position | Primers' seqoence 5'-3' | Reference | Amplicon size(bp) |
---|---|---|---|---|---|
001 | TACAGGA | 255591–255646 | (+)ggtgaattaggatggaaatgc | [21] | 1159 |
(-)tgaagtagctctgcaatatctga | |||||
(-)tgcctcttctagggcacaa | this paper | The primer was used for only sequence. | |||
002 | CAGT | 537729–537760 | (+)ttgataatatagaaagaggcgaagc | [21] | 510 |
(-)tccatacccaaaagaaaagca | |||||
005 | AGACACA | 354493–354527 | (+)attgaaggacgaaaccgatg | [21] | 598 |
(-)tcccaaggttttcaaattgc | |||||
077 | TTTG | 655277–655332 | (+)tgactgatggcaaaagatgg | [21] | 528 |
(-)agacacgccaaacaaggaat |