Table 2.
Sample | Total reads | Aligned reads | Alignment rate | # unique CpGs | Mean CpG coverage | C methylated in CpG context |
---|---|---|---|---|---|---|
Control | 59,563,167 | 22,886,821 | 38.4% | 2,238,235 | 27.0x | 24.2% |
CVID 3 | 55,756,378 | 23,157,707 | 41.5% | 2,321,898 | 26.7x | 28.0% |
CVID 4 | 68,852,020 | 27,149,164 | 39.4% | 2,630,177 | 27.7x | 31.0% |