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. Author manuscript; available in PMC: 2016 Sep 23.
Published in final edited form as: J Am Chem Soc. 2015 Sep 11;137(37):12131–12142. doi: 10.1021/jacs.5b08027

Table 4.

Biphasic Kinetic Parameters for Correct dNTP Incorporation onto 5′-[32P]-Labeled DNA (30 nM) in the Presence of an Unlabeled DNA Trap (5 µM) at 37 °C

DNA substrate correct dNTP Af (nM)a kf (s−1) As (nM)a ks (s−1)
19/26-mer 1.2 mM dGTP 26.7 ± 0.7 (89%) 1.8 ± 0.2
20/26-mer 1.2 mM dCTP 26.0 ± 0.6 (87%) 2.8 ± 0.3
21/26-mer 1.2 mM dGTP 25.2 ± 0.6 (84%) 0.49 ± 0.04
19/26-mer-dG1,8 1.2 mM dGTP 22.9 ± 0.6 (76%) 0.74 ± 0.06
20/26-mer-dG1,8 0.2 mM dCTP 5.4 ± 0.5 (18%) 0.014 ± 0.003 18.7 ± 0.9 (62%) (2.4 ± 0.4) × 10−4
0.7 mM dCTP 5.6 ± 0.4 (19%) 0.039 ± 0.007 18.1 ± 0.6 (60%) (4.6 ± 0.4) × 10−4
1.2 mM dCTP 5.4 ± 0.5 (18%) 0.043 ± 0.007 18.2 ± 0.5 (61%) (1.9 ± 0.1) × 10−3
21/26-mer-dG1,8 1.2 mM dGTP 24.4 ± 0.4 (81%) 0.075 ± 0.005
a

Calculated as (reaction amplitude/30 nM) × 100.