Figure 1.

A connecting path between two non-overlapping paired-end sequencing reads within a de Bruijn graph. Konnector joins the sequence provided by the input paired-end reads (green) by means a graph search for a connecting path (blue). Sequencing errors in the input sequencing data produce bubbles and branches in the de Bruijn graph of up to k nodes in length (red). Bloom filter false positives produce additional branches (yellow) with lengths that are typically much shorter than the error branches.