Table 2. Geometry and binding energies of stacked CG base pairs from B97-D/def2-TZVP (Å, ° and kcal/mol).
Cent…
Cent a |
Dihedral a | Binding
Energy |
|
---|---|---|---|
C | 3.381 | 9.0 | -16.07 |
5-mC | 3.310 | 12.5 | -17.52 |
5-hC | 3.361 | 9.4 | -22.12 |
5-fC | 3.451 | 2.9 | -14.65 |
5-caC | 3.823 | 32.6 | -15.56 |
a Cent…Cent refers to the distance between centroids of 6-membered rings; Dihedral refers to the angle between mean planes of rings.