Skip to main content
. 2015 Sep 25;47:74. doi: 10.1186/s12711-015-0156-y

Table 2.

QTL detected for excretion-related traits

Chr Traita Position (cM) CIb Flanking markers of CI Level of significance QTL effectd (NFe)
Chr-wide Genome-widec
2 PHG 48.0 47.4–60.2 Gga_rs14152021 Gga_rs14158104 0.025 0.150 0.241 (4)Fg
8 FEW/FI 4.0 0–5.3 Gga_rs158923080 Gga_rs16617921 0.027 NS 0.178 (5)
11 N/P 55.0 51.0–60.0 Gga_rs14029626 Gga_rs15623939 0.047 NS 0.177 (4)
16 PHG 2.0 Gga_rs16057130 Gga_rs15788030 0.047 NS 0.186 (4)
19 PHJ 0.0f 0.0–5.5 Gga_rs16076471 GGaluGA124279 0.048 NS 0.254 (2)
DEW 9.0 0.0–18.5 Gga_rs16076471 Gga_rs15842421 0.050 NS 0.161 (3)
26 DEW 25.0 20.7–27.5 Gga_rs16201345 GGaluGA196847 0.042 NS 0.248 (2)
N/P 34.0 28.1–37.0 GGaluGA196847 Gga_rs14300646 0.010 NS 0.184 (5)
27 PHG 19.7 0.0–32.1 Gga_rs16205037 GGaluGA199670 0.045 NS 0.214 (3)
28 WC 8.0 0.0–14.1 Gga_rs14304396 Gga_rs16211067 0.030 NS 0.171 (5)

aFEW, DEW: fresh and dry excreta weight between 17 and 20 days; FEW/FI, DEW/FI: fresh and dry excreta weight between 17 and 20 days relative to feed intake between 17 and 20 days; PHE: pH in the excreta; WC: water content of excreta, N/P: nitrogen to phosphorus ratio in excreta

b1-LOD-drop off confidence interval (lower and upper boundaries, cM)

cNS: P > 0.150 at the genome wide level

dQTL effect as a proportion of the phenotypic standard deviation of trait

eNumber of F1 sire families heterozygous for the QTL (P < 0.05, Student test)

fQTL located at the telomere

gF:QTL fixed in F1 sire families in which it is significant