TABLE 2.
Functional classification of biological processes by GOEAST [PMID: 18487275]
GO Identification | Term | Level | Log Odds-Ratio | P |
GO:0019752 | Carboxylic acid metabolic process | 6 | 2.26 | 2.27E-07 |
GO:0032787 | Monocarboxylic acid metabolic process | 7 | 2.64 | 5.72E-06 |
GO:0006631 | Fatty acid metabolic process | 8 | 2.79 | 4.40E-05 |
GO:0019217 | Regulation of fatty acid metabolic process | 6 | 3.75 | 0.002402 |
GO:0046470 | Phosphatidylcholine metabolic process | 8 | 4.46 | 0.01085 |
GO:0009062 | Fatty acid catabolic process | 9 | 3.78 | 0.010955 |
GO:0042304 | Regulation of fatty acid biosynthetic process | 7 | 4.29 | 0.015209 |
GO:0006695 | Cholesterol biosynthetic process | 7 | 4.29 | 0.015209 |
GO:0045833 | Negative regulation of lipid metabolic process | 6 | 3.64 | 0.015215 |
GO:0008203 | Cholesterol metabolic process | 6 | 3.12 | 0.018173 |
GO:0072329 | Monocarboxylic acid catabolic process | 8 | 3.48 | 0.022193 |
GO:0006635 | Fatty acid β-oxidation | 10 | 4.00 | 0.027045 |
GO:0016126 | Sterol biosynthetic process | 6 | 4.00 | 0.027045 |
GO:0019318 | Hexose metabolic process | 6 | 2.69 | 0.027395 |
GO:0046395 | Carboxylic acid catabolic process | 7 | 2.68 | 0.02781 |
GO:0046890 | Regulation of lipid biosynthetic process | 6 | 2.96 | 0.029911 |
GO:0007169 | Transmembrane receptor protein tyrosine kinase signaling pathway | 7 | 2.23 | 0.031379 |
GO:0006656 | Phosphatidylcholine biosynthetic process | 9 | 4.82 | 0.032319 |
GO:0015908 | Fatty acid transport | 10 | 3.72 | 0.047506 |
GO:0043066 | Negative regulation of apoptotic process | 7 | 1.60 | 0.049827 |
Levels 6–10 are shown. The top 200 most differentially expressed genes were selected, and the mouse genome was chosen as background in the analysis. Results with adjusted P < 0.05 and Log odds-ratio >1 are listed in the order of P value. Log odds-ratio indicates the relative abundance of this GO term compared with a random situation. Log odds-ratio = 1 means that this GO term is twice as abundant in the listed genes in comparison with the random situation.