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. 2015 Jun 24;6(10):5554–5563. doi: 10.1039/c5sc01403d

Table 2. Standard single stranded DNA fragments with their corresponding base adducted in comparison with the hot spot database13 a .

Standard ss-DNA Sequence LC-MS/MS DATA
Common Hot Spots from Database1315,18
Base adducted Codon
Fragment 1 GGCGGCATG GG*CGGCATG 244 c 244 c , 245 b e
GGCGGCATG* 246 244 c , 245 b e
Fragment 2 AACCGGAGGCCCATCCTCA AACCGGAGG*CCCATCCTCA 249 b c 248 b c d e f , 249 b c
 
Complementary strands
Fragment 3 GTGAGGATGGGCCTCCGGTTCATG GTGAG*GATGGGCCTCCGGTTCATG
Fragment 4 CCGCCCATG CCG*CCCATG
CCGCCCA*TG
CCGCCCATG*

aPossible cancers due to BPDE.

bNon small cell lung cancer.

cSmall cell lung cancer.

dHead and neck cancer.

eColorectal cancer.

fSkin cancer.