Table 1.
Statistics of DGE sequencing for CATAS8-79 and PR107 libraries.
| Sample | Number /% |
100–500 nt | 500–1000 nt | 1000–1500 nt | 1500–2000 nt | > 2000 nt | N50 | Mean (bp) | No. | Length (bp) |
|---|---|---|---|---|---|---|---|---|---|---|
| VT879 — contig | Number | 296,736 | 10,351 | 1649 | 531 | 261 | 133 | 142 | 305,004 | 43,311,050 |
| Percent | 95.87% | 3.34% | 0.53% | 0.17% | 0.08% | |||||
| VT107 — contig | Number | 308,262 | 9932 | 1396 | 360 | 129 | 124 | 137 | 315,643 | 43,387,443 |
| Percent | 96.31% | 3.10% | 0.44% | 0.11% | 0.04% | |||||
| VT879 — unigene | Number | 41,457 | 8474 | 2224 | 824 | 592 | 509 | 421 | 53,571 | 22,572,807 |
| Percent | 77.39% | 15.82% | 4.15% | 1.54% | 1.11% | |||||
| VT107 — unigene | Number | 46,999 | 8243 | 1744 | 539 | 281 | 427 | 375 | 57,806 | 21,689,990 |
| Percent | 81.30% | 14.26% | 3.02% | 0.93% | 0.49% | |||||
| All — unigene | Number | 35,195 | 11,019 | 3323 | 1277 | 1015 | 640 | 526 | 51,829 | 27,237,155 |
| Percent | 67.91% | 21.26% | 6.41% | 2.46% | 1.96% |