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. Author manuscript; available in PMC: 2016 Oct 1.
Published in final edited form as: Allergy. 2015 Jul 24;70(10):1309–1318. doi: 10.1111/all.12683

Table 4.

eQTL of six most consistently replicated regions for asthma susceptibility

SNP Gene Chr Location Distance to Gene Minor Allele MAF GSDMB ORMDL3

BEC BAL BEC BAL

Beta* P-value (adjusted) Beta* P-value (adjusted) Beta* P-value Beta* P-value
rs8067378 GSDMB 17 3′ −9500 G 0.50 −0.52 1.3x10−4 (1.9x10−3) −0.35 0.04 −0.05 0.74 0.11 0.52
rs2305480 GSDMB 17 coding 96_42 T 0.35 −0.45 4.4x10−4 (4.7x10−3) −0.23 0.12 0.15 0.27 −0.05 0.75
rs7216389 GSDMB 17 intron −1199 C 0.39 −0.43 1.1x10−3 (0.01) −0.24 0.10 0.07 0.62 0.00 0.99

TSLP WDR36

rs1837253 TSLP 5 5′ −5518 T 0.26 −0.24 0.15 −0.03 0.86 −0.07 0.69 0.05 0.80
rs3806932 TSLP 5 5′ −1715 G 0.50 −0.39 2.3x10−3 (0.05) −0.85 7.9x10−11 (1.0x10−4) −0.07 0.61 −0.04 0.76
rs3806933 TSLP 5 5′ −648 T 0.36 −0.43 7.8x10−4 (0.02) −0.82 1.5x10−9 (1.0x10−4) −0.06 0.66 −0.01 0.94
rs2289276 TSLP 5 5UTR 117_81 T 0.24 −0.51 5.2x10−4 (0.01) −0.66 2.7x10−5 (8.0x10−4) −0.21 0.15 −0.09 0.57
rs2416257 WDR36 5 intron −798 A 0.12 −0.17 0.44 −0.81 5.5x10−4 (0.02) 0.29 0.20 0.20 0.41

IL13 RAD50

rs2244012 RAD50 5 intron −6166 C 0.38 −0.21 0.11 0.19 0.18 0.10 0.47 0.05 0.71
rs20541 IL13 5 coding 97_10 T 0.25 0.05 0.76 0.32 0.07 0.17 0.27 0.12 0.48

IL1RL1 IL18R1

rs1420101 IL1RL1 2 coding 68_101 A 0.38 −0.16 0.30 −0.22 0.21 0.02 0.88 −0.10 0.57
rs12999517 IL1RL1 2 intron −236 C 0.14 −0.02 0.90 −0.68 4.4x10−4 (9.5x10−3) 0.33 0.08 −0.12 0.56
rs3771166 IL18R1 2 intron −1694 T 0.41 0.15 0.27 −0.14 0.31 −0.16 0.23 −0.06 0.68

IL33

rs992969 IL33 9 5′ −31981 A 0.27 0.69 1.3x10−6 (1.0x10−4) 0.11 0.53
rs3939286 IL33 9 5′ −31579 A 0.33 0.50 2.0x10−4 (5.9x10−3) 0.21 0.18

HLA-DQB1

rs1063355 HLA-DQB1 6 3UTR 50_298 A 0.46 0.63 8.0x10−7 (1.0x10−4) 0.05 0.71

*

Beta is the correlation coefficient of SNP vs. gene expression value on the basis of minor allele from linear additive model.