Table 3.
Genome statistics
| Attribute | Value | % of Totala |
|---|---|---|
| Genome size (bp) | 2,832,347 | 100.00 |
| DNA coding (bp) | 2,517,744 | 88.89 |
| DNA G + C (bp) | 41.83 | |
| DNA scaffolds | 74 | 100.00 |
| Total genes | 2,998 | 100.00 |
| Protein coding genes | 2,895 | 96.56 |
| RNA genes | 103 | 3.44 |
| Pseudo genes | not determined | not determined |
| Genes in internal clusters | not determined | not determined |
| Genes with function prediction | 1,637 | 54.60 |
| Genes assigned to COGs | 2,349 | 78.35 |
| Genes with Pfam domains | 2,158 | 71.98 |
| Genes with signal peptides | 103 | 3.44 |
| Genes with transmembrane helices | 674 | 23.28 |
| Number of CRISPR candidates | 3 | |
| Confirmed CRISPR(s) | 1 | |
| Unconfirmed CRISPR(s) | 2 |
aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome