Table 2.
Assembly characteristics of the sequenced Murray collection isolates
Assembly characteristics [mean (range)] | |||||
---|---|---|---|---|---|
Genus | No. | GC content | Total length (bp) | Contigs | N50 (bp) |
Salmonella | 174 | 52 | 4739744 | 44 | 316870 |
(51–52) | (4450735–5136048) | (15–126) | (70209–992086) | ||
Escherichia/Shigella | 140 | 50 | 4679816 | 258 | 64933 |
(50–51) | (3820214–5434207) | (63–567) | (14204–369379) | ||
Klebsiella | 35 | 56 | 5287110 | 172 | 117718 |
(55–57) | (4980231–5582843) | (24–286) | (58784–465957) | ||
Proteus | 14 | 39 | 3935672 | 35 | 313856 |
(38–39) | (3823752–3991064) | (18–58) | (201904–763476) | ||
Morganella | 3 | 51 | 3842744 | 23 | 557210 |
(NA) | (3744830–3948322) | (19–29) | (403231–664661) | ||
Enterobacter | 2 | 54 | 5364204 | 58 | 341570 |
(NA) | (5291805–5436603 ) | (52–64) | (341563–341 576) | ||
Aeromonas | 1 | 59 | 4494408 | 39 | 166907 |
Raoultella | 1 | 55 | 5488300 | 33 | 336936 |