Table 1.
Virophage-like genes
| ORF no. | Putative function | RPKM | Percentile expression,* % | Best hit† |
| Scaffold 2 largest elements | ||||
| Bn2_1 | Orphan protein | 0.2 | 3.9 | |
| Bn2_2 | Kelch and kinase domain protein | 16.7 | 74.5 | Dendroctonus ponderosae 478256302 (2e-32) |
| Bn2_3 | Orphan protein | 6.3 | 55.1 | |
| Bn2_4 | Unknown virophage protein | 1.8 | 27.5 | Zamilon 563399747 (2e-04) |
| Bn2_5 | Adhesin-like protein | 1.0 | 19.0 | Escherichia coli 693111543 (9e-13) |
| Bn2_7 | Orphan protein | 0.9 | 16.7 | |
| Bn2_8 | Orphan protein | 0.0 | 0.0 | |
| Bn2_9 | DNA polymerase B | 0.9 | 17.2 | Mavirus 326439151 (2e-09) |
| Bn2_10 | Orphan protein | 0.5 | 10.4 | |
| Bn2_11 | S3 helicase | 0.8 | 15.1 | YSL5 701905635 (2e-28) |
| Bn2_13 | Orphan protein | 604.1 | 99.2 | |
| Bn2_14 | Orphan protein | 125.7 | 95.6 | |
| Bn2_15 | Orphan protein | 194.4 | 97.2 | |
| Bn2_17 | Orphan protein | 21.8 | 78.7 | |
| Bn2_18 | DnaJ domain protein | 24.4 | 80.4 | Ostreococcus lucimarinus virus 313843979 (2e-39) |
| Bn2_19 | DNA-packaging ATPase | 14.2 | 71.8 | OLV 322510450 (7e-25) |
| Bn2_20 | Orphan protein | 9.4 | 63.8 | |
| Bn2_21 | Cysteine protease | 1.5 | 24.5 | OLV 322510453 (5e-08) |
| Bn2_22 | Lipase | 5.1 | 50.5 | Mavirus 326439161 (6e-04) |
| Bn2_23 | Orphan protein | 4.2 | 46.1 | |
| Bn2_25 | Minor capsid protein | 4.2 | 45.8 | OLV 322510454 (2e-11) |
| Bn2_26 | Major capsid protein | 3.9 | 44.0 | OLV 322510455 (3e-16) |
| Bn2_27 | Unknown protein | 1.4 | 24.0 | Guillardia theta 551643434 (4e-16) |
| Bn2_28 | Ribonucleotide reductase small subunit | 1.6 | 25.9 | Cafeteria roenbergensis virus 310831442 (3e-80) |
| Bn2_29 | rve integrase | 2.6 | 35.3 | Dictyostelium fasciculatum 470248944 (3e-39) |
| Bn2_31 | Kelch domain protein | 33.4 | 84.5 | Strongylocentrotus purpuratus 390342441 (6e-35) |
| Bn2_33 | Orphan protein | 0.2 | 5.2 | |
| Other remarkable ORFs found in smaller elements | ||||
| Bn119_7 | ZnR and GIY-YIG domains | 3.6 | 42 | Phytophthora sojae 695382398 (3e-05) |
| Bn161_7 | Ankyrin domain protein | 93.4 | 94 | Amoebophilus asiaticus 501449850 (3e-34) |
| Bn92_2 | Unknown phage protein | 0.0 | 1 | Synechococcus phage 472343273 (1e-05) |
| Bn92_3 | Ankyrin domain protein | 0.1 | 4 | Pseudogymnoascus pannorum 682412062 (3e-08) |
| Bn187_9 | Unknown phage protein | 20.4 | 78 | Vibrio phage 510792797 (5e-06) |
| Bn84_33 | Unknown virophage protein | 3.0 | 39 | YSLV5 701905611 (2e-07) |
*
Percentile rank calculated over all B. natans genes.
†
Species name and GenBank identifier (BLAST E value).