Table 1.
Summary of E. tenella genome-wide genetic data calculated using Sequenom MassARRAY genotyping
| Region | N | SNP haplotypes | Het (±) | IAS | P | |
| Total | Region specific | |||||
| All | 244 | 93 | — | 0.3611 (0.0189) | 0.1238 | <0.0001 |
| Northern India | 86 | 8 | 7 | 0.3331 (0.0254) | 0.1153 | <0.0001 |
| Southern India | 53 | 50 | 49 | 0.3405 (0.0212) | 0.0087 | ns |
| Egypt | 40 | 21 | 13 | 0.1925 (0.0316) | 0.0597 | <0.0001 |
| Libya | 51 | 11 | 3 | 0.1611 (0.0247) | 0.0533 | <0.0001 |
| Egypt + Libya | 91 | 25 | 24 | 0.1789 (0.0275) | 0.0533 | <0.0001 |
| Nigeria | 14 | 14 | 13 | 0.3998 (0.0224) | 0.0012 | ns |
Northern India included samples collected in Haryana, Punjab, Uttarakhand, and Uttar Pradesh. Southern India included samples collected in Andra Pradesh, Karnataka, Kerala, and Tamil Nadu. N, the number of samples tested. The number of SNP haplotypes was calculated using DnaSP v5.10.01. Het, mean genetic diversity; IAS, standardized index of association (calculated using only the first SNP per specific gene-associated sequence or chromosomal repeat type segment to avoid bias as a consequence of close physical linkage), with statistical significance indicated as P, both calculated using LIAN v3.6; ns, not statistically significant.