Table 1. Locations and names of DENV-2 isolates collected worldwide during 1944–2013.
Country | Name of isolate | Genome (bp) | Year | Nucleotide Accession | Protein Accession | Reference |
---|---|---|---|---|---|---|
Australia | TSV01 | 10723 | 1993 | AY037116 | AAK67712 | [46] |
Brunei | DS09-280106 | 10709 | 2006 | EU179859 | ABW06614 | [47] |
DS31-291005 | 10709 | 2005 | EU179857 | ABW06612 | [47] | |
Burkina Faso | 1349 | 10723 | 1983 | EU056810 | ABW74619 | [48] |
China | GD01/03 | 10723 | 2003 | FJ196853 | ACN54392 | [49] |
44 | 10723 | 1989 | AF204177 | AAF18446 | Direct submission | |
43 | 10723 | 1987 | AF204178 | AAF18447 | Direct submission | |
China 04 | 10723 | 1985 | AF119661 | AAD18036 | Direct submission | |
FJ11/99 | 10723 | 1999 | AF359579 | AAK49562 | Direct submission | |
FJ-10 | 10723 | 2000 | AF276619 | AAF86463 | Direct submission | |
China/India | QHD13CAIQ | 10723 | 2013 | KF479233 | AHA42535 | [32] |
Colombia | CO/BID-V3358 | 10667 | 1986 | GQ868592 | ACW82882 | Direct submission |
Fiji | FJ/UH21/1971 | 10714 | 1971 | HM582099 | ADM26218 | [50] |
Guam | GU/BID-V2950 | 10967 | 2001 | HM488257 | ADK26435 | Direct submission |
Guatemala | American Asian | 10725 | 2009 | HQ999999 | AER45462 | [34] |
India | GWL18 | 10670 | 2001 | DQ448231 | ABE02262 | Direct submission |
IN/BID-V2961 | 10669 | 2006 | FJ898454 | ACQ44493 | Direct submission | |
Od2112 | 10670 | 2011 | JQ955624 | AFZ40226 | [22] | |
RR44 | 10670 | 2009 | JQ955623 | AFZ40225 | [22] | |
1392 | 10670 | 2009 | JX475906 | AFZ40227 | [22] | |
Indonesia | 1016DN | 10723 | 1975 | GQ398258 | ADK37474 | [51] |
1017DN | 10723 | 1976 | GQ398259 | ADK37475 | [51] | |
1070DN | 10723 | 1976 | GQ398260 | ADK37476 | [51] | |
98900663DHF | 10723 | 1998 | AB189122 | BAD42415 | Direct submission | |
BA05i | 10723 | 2004 | AY858035 | AAW51406 | [52] | |
1022DN | 10724 | 1975 | GQ398268 | ADK37484 | [51] | |
New Guinea | NGC | 10724 | 1944 | AF038403 | AAC59275 | [53] |
Pakistan | Pak-L-2011 | 10723 | 2011 | KF041234 | AHC72406 | [33] |
Pak-L-2011 | 10723 | 2011 | KF041232 | AHC72404 | [33] | |
Pak-K-2009 | 10723 | 2009 | KF041237 | AHC72409 | [33] | |
Pak-K-2009 | 10723 | 2009 | KF041235 | AHC72407 | [33] | |
Pak-M-2011 | 10723 | 2011 | KF041233 | AHC72405 | [33] | |
PakL-2013 | 10629 | 2013 | KJ010186 | AHM25910 | Direct submission | |
Pak—L-2011 | 10629 | 2011 | KJ010185 | AHM25909 | Direct submission | |
Pak-L-2010 | 10629 | 2010 | KF360005 | AHA80987 | Direct submission | |
Pak-L-2008 | 10723 | 2008 | KF041236 | AHC72408 | [33] | |
Peru | PE/NFI1159 | 10723 | 2010 | KC294223 | AGX15388 | [54] |
PE/IQA 2080 | 10723 | 2010 | KC294221 | AGX15386 | [54] | |
Singapore | SG/D2Y98P-PP1 | 10723 | 2009 | JF327392 | AEI29060 | [56] |
SG/05K3295DK1 | 10723 | 2005 | EU081177 | ABW82013 | [57] | |
Sri Lanka | LK/BID-V2421 | 10629 | 2003 | GQ252676 | ACS32038 | Direct submission |
LK/BID-V2422 | 10628 | 2004 | GQ252677 | ACS32039 | Direct submission | |
LK/BID-V2416 | 10628 | 1996 | FJ882602 | ACQ44409 | Direct submission | |
Taiwan | 1222-DF-06 | 10671 | 2002 | DQ645546 | ABG29081 | Direct submission |
TW/BID-V5056 | 10615 | 2008 | HQ891024 | AEH59344 | Direct submission | |
Thailand | TH/BID-V3357 | 10678 | 1964 | GQ868591 | ACW82881 | Direct submission |
USA | US/BID-V5412 | 10484 | 2007 | JF730050 | AEH59345 | Direct submission |
US/BID-V5055 | 10488 | 2008 | JN796245 | AET72454 | Direct submission | |
IQT1797 | 10674 | 1998 | AF100467 | AAD32962 | [55] | |
Vietnam | VN/BID-V735 | 10678 | 2006 | EU482672 | ACA48939 | Direct submission |
USA-DENV1 | US/Hawaii/1944 | 10734 | 1944 | EU848545 | ACF49259 | Direct submission |