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. 2015 Jul 7;64(10):3464–3474. doi: 10.2337/db14-1314

Table 1.

eMS that potentially mediate the relationship between BMI and cholesterol network gene expression

eMS BMI-methylation
BMI-gene expression
Indirect
Direct
CpG ID CpG location β SE P value FDR Gene β P value β P value
cg06500161 Body (ABCG1) 0.005 0.001 2.8E-07 5.4E-04 ABCG1 −0.005 2.6E-06 −0.025 3.7E-12
cg05323251 Body (ICAM3) 0.003 0.001 3.0E-06 2.9E-03 LDLR 0.001 2.4E-03 0.012 1.5E-07
cg10192877 Body (ABCG1) 0.004 0.001 5.3E-05 0.02 ABCG1 −0.002 1.1E-03 −0.025 3.6E-14
cg05119988 5′UTR (SC4MOL) −0.006 0.001 1.0E-04 0.03 SC4MOL 0.001 1.2E-03 0.009 1.2E-06

Effects of BMI on methylation of cyan module gene eMS (β, SE, P value, and genome-wide FDR) and the indirect (mediated) and direct effects (β, P value) of BMI on gene expression. Indirect effects were estimated using SEM for methylation mediating the effect of BMI on gene expression (log2 fold change of expression per 1-unit increase in BMI [kg/m2]). Some eMS were located within gene bodies (gene containing CpG in parentheses) or in the 5′ untranslated regions (UTR) of genes. Analyses included 1,264 CD14+ monocyte samples and were adjusted for age, sex, race, study site, and residual sample contamination with nonmonocytes.