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. 2015 Sep 29;16:733. doi: 10.1186/s12864-015-1934-1

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© Yin et al. 2015

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 5 — Alignment of PST1-1, PST2-1, and PST3-1 to related phage from E. coli O157:H7 strains Sakai, O104:H4 2011C-3493, and EC4115, respectively. BLAST comparisons of (a) PST1-1 and phage from EDL933, (b) PST2-1 and phage from O104:H4 2011C-3493 and (c) PST3-1 and phage from EC4115 were visualized using Easyfig [77]. Blue shaded regions connect homologous sequences and orange shaded regions connect reverse complemented homologous sequences. Arrows represent ORFs. Light orange, light blue and light yellow arrows represent early regulatory genes, replication genes and antiterminator Q, respectively. Light pink arrows represent bsuBI restriction/modification system. Dark pink and green arrows designate the location of stx2 and IS629, respectively