Table 1. Summary of RNA-seq samples and their mapping rate.
Breed/Library | Reads # | Mapping rate by aligned reads on assembled contigs |
---|---|---|
RBC/FB | 75,136,718 | 68.6% |
RBC/MB | 63,634,582 | 67.8% |
RBC/O | 35,523,482 | 68.6% |
RBC/T | 50,943,940 | 67.1% |
LW/FB | 48,319,732 | 74.6% |
LW/MB | 68,187,382 | 72.8% |
LW/O | 63,770,574 | 75.3% |
LW/T | 53,743,900 | 70.2% |
HW/FB | 40,652,156 | 67.7% |
HW/MB | 69,818,488 | 68.1% |
HW/O | 65,763,298 | 67.8% |
HW/T | 63,851,018 | 67.3% |