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. 2015 Sep 29;10(9):e0139324. doi: 10.1371/journal.pone.0139324

Table 3. Top 10 most significant DEGs between HW and LW Quail.

Gene_Symbol* logFC^ logCPM Raw P-Value FDR-Adjusted P-value
CHKA -7.94168 2.47913 4.99E-21 1.75E-17
GPR87 5.724773 3.538677 6.78E-17 1.19E-13
NYAP1 6.82748 1.707929 1.00E-14 1.17E-11
MSLNL 5.720661 2.693912 3.78E-13 3.31E-10
ANR26 -3.82005 1.402079 1.15E-12 8.06E-10
OASL2 -2.2346 6.827207 1.51E-12 8.81E-10
IFI6 -2.15212 5.84676 9.03E-12 4.52E-09
T22D1 1.956184 5.098446 6.81E-11 2.72E-08
MTA70 -1.81969 6.818426 6.98E-11 2.72E-08
RBBP7 4.489682 1.741669 2.39E-10 8.37E-08

*The log2 fold change (log FC), log2 counts-per-million (logCPM), and P-values were calculated using edgeR.

^Expanded gene names, listed in alphabetical order: ANR26 = ANR26 protein-coding gene; CHKA = choline kinase alpha; GPR87 = G protein-coupled receptor 87; IFI6 = Interferon, Alpha-Inducible Protein 6; MSLNL = Mesothelin-Like; MTA70 = Methyltransferase Like 3; NYAP1 = Neuronal Tyrosine-Phosphorylated Phosphoinositide-3-Kinase Adaptor 1; OASL2 = 2'-5'-oligoadenylate synthase-like protein 2; RBBP7 = Retinoblastoma Binding Protein 7; T22D1 = Inosine-5'-monophosphate dehydrogenase