Table 3. Top 10 most significant DEGs between HW and LW Quail.
| Gene_Symbol* | logFC^ | logCPM | Raw P-Value | FDR-Adjusted P-value |
|---|---|---|---|---|
| CHKA | -7.94168 | 2.47913 | 4.99E-21 | 1.75E-17 |
| GPR87 | 5.724773 | 3.538677 | 6.78E-17 | 1.19E-13 |
| NYAP1 | 6.82748 | 1.707929 | 1.00E-14 | 1.17E-11 |
| MSLNL | 5.720661 | 2.693912 | 3.78E-13 | 3.31E-10 |
| ANR26 | -3.82005 | 1.402079 | 1.15E-12 | 8.06E-10 |
| OASL2 | -2.2346 | 6.827207 | 1.51E-12 | 8.81E-10 |
| IFI6 | -2.15212 | 5.84676 | 9.03E-12 | 4.52E-09 |
| T22D1 | 1.956184 | 5.098446 | 6.81E-11 | 2.72E-08 |
| MTA70 | -1.81969 | 6.818426 | 6.98E-11 | 2.72E-08 |
| RBBP7 | 4.489682 | 1.741669 | 2.39E-10 | 8.37E-08 |
*The log2 fold change (log FC), log2 counts-per-million (logCPM), and P-values were calculated using edgeR.
^Expanded gene names, listed in alphabetical order: ANR26 = ANR26 protein-coding gene; CHKA = choline kinase alpha; GPR87 = G protein-coupled receptor 87; IFI6 = Interferon, Alpha-Inducible Protein 6; MSLNL = Mesothelin-Like; MTA70 = Methyltransferase Like 3; NYAP1 = Neuronal Tyrosine-Phosphorylated Phosphoinositide-3-Kinase Adaptor 1; OASL2 = 2'-5'-oligoadenylate synthase-like protein 2; RBBP7 = Retinoblastoma Binding Protein 7; T22D1 = Inosine-5'-monophosphate dehydrogenase