Table 3. Capsid peptide sequences identified from MHC molecules using a database containing sequences for proteins 1–4.

Donor	Sequence	Protein	Amino acid start/end	Expect value
AAV-2 CAP	SLDRLMNPL	AAV2 capsid	429–437	0.03
	VLPGYKYLG	AAV2 capsid	46–54	0.29
AAV-2 FIX	SLDRLMNPL	AAV2 capsid	429–437	0.0068
	LMNPLIDQ	AAV2 capsid	433–440	0.19
	LNNGSQAVGR	AAV2 capsid	380–389	0.23
	NNHLYKQIS	AAV2 capsid	253–261	0.31
	GTTTIANNL	AAV2 capsid	327–335	0.33

AAV, adeno-associated virus.