Table 1.
Aux/IAA gene family in wheat.
| Gene | Sequence IDa | Scaffold | Location | ORF bp | Length AA |
|---|---|---|---|---|---|
| TaIAA1-A | TaLoc010775.4 | 3295285 | 1AS:31279430-31280500 | 1071 | 208 |
| TaIAA1-B | Traes_1EEE57162.1 | 2899111 | 1BS:2616364-2615360 | 1042 | 209 |
| TaIAA1-D | Traes_CA4185D11.1 | 1883869 | 1DS:70882162-70883423 | 1079 | 207 |
| TaIAA2-A | Traes_372F80BF9.1 | 3308105 | 1AS:163196691-163198564 | 1349 | 233 |
| TaIAA2-B | Traes_E5A12CB09.1 | 3449004 | 1BS:86215073-86216744 | 1366 | 235 |
| TaIAA2-D | Traes_565BF8DDA.1 | 1909974 | 1DS:52657909-52659817 | 1367 | 236 |
| TaIAA3-A | Traes_EADB6A2A0.1 | 3311117 | 1AS:166600171-166602694 | 1936 | 199 |
| TaIAA3-B | Traes_8A19C460B.1 | 3479210 | 1BS:113674501-113677207 | 1964 | 199 |
| TaIAA3-D | Traes_0898FA765.1 | 92692 | 1DS:64906433-64908913 | 1932 | 199 |
| TaIAA4-A | TaLoc011447.4 | 3922404 | 1AL:216593028-216593434 | 1731 | 301 |
| TaIAA4-B | Traes_BFB6F2ABC.1 | 1095310 | 1BL:232504409-232504535 | 2254 | 292 |
| TaIAA4-D | TaLoc007655.5 | 2239906 | 1DL:119721561-119717330 | 1954 | 277 |
| TaIAA5-A | Traes_859346448.1 | 3893649 | 1AL:235709512-235704959 | 2732 | 242 |
| TaIAA5-B | Traes_4B1CFEF1C.1 | 3916489 | 1BL:278915207-278919038 | 1959 | 231 |
| TaIAA5-D | Traes_4F703A523.1 | 2279082 | 1DL:125510254-125514512 | 3289 | 286 |
| TaIAA6-A | Traes_8F14EF2CE.1 | 6390277 | 2AL:237394204-237395143 | 598 | 168 |
| TaIAA6-B | Traes_E592F41F5.1 | 8087827 | 2BL:325907516-325908479 | 590 | 168 |
| TaIAA7-A | Traes_A598DE96B.1 | 6368366 | 2AL:253631713-253642960 | 600 | 159 |
| TaIAA8-B | Traes_B2D711406 | 8005976 | 2BL:332291714-332296345 | 1642 | 328 |
| TaIAA9-A | Traes_771897131.1 | 3339447 | 3AS:19556131-19557111 | 1168 | 263 |
| TaIAA9-B | Traes_99D28E887.1 | 10603561 | 3B:113552214-113552559 | 1480 | 242 |
| TaIAA10-A | Traes_B855A6F86.1 | 3407523 | 3AS:22626398-22625699 | 2194 | 219 |
| TaIAA10-B | Traes_EC3C8E7C1.1 | 10445740 | 3B:133879562-133881697 | 2162 | 203 |
| TaIAA11-A | Traes_650C7A7A9.1 | 3299314 | 3AS:47736317-47738563 | 3529 | 266 |
| TaIAA11-B | Traes_F684DCAB2.1 | 10498911 | 3B:181982813-181985970 | 3041 | 279 |
| TaIAA11-D | Traes_BA5B9A06A.1 | 1300831 | 3DS:19461793-19465907 | 2195 | 230 |
| TaIAA12-A | Traes_C8CC634C4.1 | 36155 | 3AL:151818719-151826972 | 2437 | 262 |
| TaIAA12-B | Traes_0D5F4D67A.1 | 10344697 | 3B:488692481-488695888 | 2621 | 257 |
| TaIAA13-A | Traes_E77F7C3EE.1 | 4414529 | 3AL:135517081-135520321 | 2062 | 342 |
| TaIAA13-B | Traes_F880EDE81.1 | 10486611 | 3B:493606171-493606667 | 2188 | 344 |
| TaIAA13-D | Traes_EC1DE49E1.1 | 6954745 | 3DL:38786327-38788145 | 2068 | 326 |
| TaIAA14-A | Traes_7A2CED8E7.1 | 4263764 | 3AL:133077764-133073796 | 1981 | 248 |
| TaIAA14-D | Traes_0BAE401F0.1 | 6949978 | 3DL:106433431-106435603 | 1387 | 333 |
| TaIAA15-A | Traes_58F89633A.1 | 7155902 | 4AL:74099030-74104019 | 4463 | 362 |
| TaIAA15-B | Traes_74A9C6245.1 | 4491507 | 4BS:24412418-24416296 | 3422 | 328 |
| TaIAA15-D | Traes_BE7FDCA21.1 | 2321248 | 4DL:59775415-59780351 | 4937 | 361 |
| TaIAA16-B | Traes_8A04B545C.1 | 4913821 | 4BL:158664312-158665608 | 739 | 104 |
| TaIAA17-A | Traes_CD68C12EF.1 | 7150674 | 4AL:130935545-130937270 | 1582 | 201 |
| TaIAA17-B | Traes_92DD5D26B.1 | 4882572 | 4BL:198119295-198121461 | 1664 | 209 |
| TaIAA17-D | Traes_03ABB2A80.1 | 2305688 | 4DL:52397663-52399704 | 1657 | 204 |
| TaIAA18-A | Traes_7C1851556.1 | 1535009 | 5AS:76737098-76736271 | 3227 | 254 |
| TaIAA18-B | Traes_940DB64ED.1 | 2245740 | 5BS:77593270-77597121 | 3206 | 270 |
| TaIAA18-D | Traes_76A4D5D4E.1 | 324017 | 5DS:30146329-30150135 | 2703 | 221 |
| TaIAA19-A | Traes_B39049539.1 | 1552256 | 5AS:60585303-60590018 | 741 | 187 |
| TaIAA19-B | Traes_8CD712BC5.1 | 2267405 | 5BS:101843501-101844847 | 742 | 198 |
| TaIAA19-D | Traes_66E5D2F6D.1 | 273208 | 5DS:37692357-37693629 | 744 | 187 |
| TaIAA20-A | Traes_A878DC43C.1 | 2806306 | 5AL:82165282-82165540 | 588 | 134 |
| TaIAA20-B | Traes_BFE717C47.1 | 10860770 | 5BL:199348871-199350113 | 596 | 134 |
| TaIAA20-D | Traes_E62BE613E | 4545184 | 5DL:114545445-114546480 | 584 | 134 |
| TaIAA21-B | Traes_9301BD154.1 | 10732661 | 5BL:215297647-215299043 | 835 | 213 |
| TaIAA21-D | Traes_C2F7D9273.1 | 4537915 | 5DL:125470184-125470754 | 769 | 160 |
| TaIAA22-A | Traes_F845558C3.1 | 2770845 | 5AL:105778316-105779350 | 1157 | 215 |
| TaIAA22-B | Traes_EC006AD0C.1 | 10845556 | 5BL:218543827-218546250 | 1571 | 254 |
| TaIAA22-D | Traes_A9B098305.1 | 4496111 | 5DL:127979413-127980640 | 1759 | 253 |
| TaIAA23-A | Traes_AB296E85D.1 | 2681049 | 5AL:107424300-107426935 | 2136 | 231 |
| TaIAA23-B | Traes_C86AC392A.1 | 5138938 | 5BL:216239503-216242516 | 2165 | 240 |
| TaIAA23-D | Traes_1CFC72F63.1 | 4490955 | 5DL:129481978-129485104 | 2148 | 233 |
| TaIAA24-A | Traes_B7F55FB76.1 | 2770845 | 5AL:124461002-124461327 | 692 | 161 |
| TaIAA24-B | Traes_67E73FC97.1 | 10921140 | 5BL:241395575-241397123 | 743 | 178 |
| TaIAA24-D | Traes_5889C544A.1 | 4490001 | 5DL:139990355-139991795 | 774 | 182 |
| TaIAA25-A | Traes_DEE1DEE94.1 | 4395378 | 6AS:31608615-31611001 | 1557 | 117 |
| TaIAA25-D | Traes_E0F641998.1 | 2125475 | 6DS:21381308-21382341 | 1597 | 126 |
| TaIAA26-A | Traes_0A9F83AC3.1 | 4403562 | 6AS:35897029-35897839 | 582 | 123 |
| TaIAA26-B | Traes_89A33174B.1 | 2993958 | 6BS:3056991-3057802 | 1228 | 99 |
| TaIAA26-D | Traes_F8829CE69 | 2057257 | 6DS:15111844-15113547 | 980 | 101 |
| TaIAA27-A | TaLoc012813.1 | 5808478 | 6AL:200726057-200726703 | 647 | 176 |
| TaIAA27-D | Traes_24EA20B3C.1 | 1744075 | 6DL:167286203-167286913 | 640 | 173 |
| TaIAA28-A | Traes_47CDA3A42.1 | 5742908 | 6AL:205873664-205877424 | 1922 | 284 |
| TaIAA28-B | Traes_C9E1E6D09.1 | 4318404 | 6BL:202673596-202673672 | 1858 | 295 |
| TaIAA28-D | Traes_AF62080FF.1 | 2949722 | 6DL:172254615-172247541 | 1865 | 283 |
| TaIAA29-A | Traes_AA598441C.1 | 960096 | 7AS:20831150-20831527 | 456 | 120 |
| TaIAA29-D | Traes_864667028.1 | 3901523 | 7DS:25442317-25442701 | 469 | 122 |
| TaIAA30-A | Traes_D88B8D286.1 | 4201216 | 7AS:61921151-61921477 | 614 | 172 |
| TaIAA30-D | TaLoc011132.1 | 3901524 | 7DS:25906078-25906449 | 577 | 161 |
| TaIAA31-A | Traes_C645A238F.1 | 4069273 | 7AS:100746802-100748856 | 1694 | 229 |
| TaIAA32-A | Traes_354EEE44E.1 | 4508087 | 7AL:107594908-107598785 | 3320 | 240 |
| TaIAA32-B | Traes_74071485F.1 | 6706664 | 7BL:190772370-190773270 | 3324 | 236 |
| TaIAA32-D | Traes_3AB665CC2.1 | 3345200 | 7DL:185819441-185820097 | 3349 | 241 |
| TaIAA33-A | Traes_4878FA904.1 | 4552230 | 7AL:118339820-118341247 | 863 | 207 |
| TaIAA33-B | TaLoc020878.2 | 6738232 | 7BL:189490619-189490875 | 761 | 164 |
| TaIAA33-D | Traes_01578227E.1 | 3377355 | 7DL:166166562-166168131 | 888 | 181 |
| TaIAA34-A | Traes_920F5EB57.1 | 4547012 | 7AL:154013235-154012654 | 1475 | 252 |
| TaIAA34-B | Traes_20B08C649.1 | 6746741 | 7BL:218108685-218108782 | 1498 | 245 |
| TaIAA34-D | Traes_36F56E8E0.1 | 3394907 | 7DL:177360424-177365747 | 1442 | 253 |
a
The sequence name beginning with TaLoc and Traes means downloaded from the wheat genome URGI database and Ensembl database, respectively.