Table 3.
Differentially expressed genes of candidates at the 0.05 level
The statistics of the t test (normal distribution) or the Wilcoxon test (non-normal distribution) on expression levels was carried out between individuals in JH and QG. P values were adjusted using the Benjamini and Hochberg method (1995), which monitored the false discovery rate (FDR). Up-regulated genes represent that the expression levels are higher in QG than in JH, and down-regulated genes show that the expression levels are lower in QG than in JH.
| Transcripts | Functional category | Annotation | P value |
|---|---|---|---|
| Up-regulated | |||
| MluLR14810 | Photosynthesis | Photosystem II reaction centre protein K | 4.46E-04 |
| MluLR17433 | Photosynthesis | Photosystem II reaction centre I protein I | 1.43E-04 |
| MluLR17106 | Photosynthesis | Photosystem I assembly protein Ycf4, photosystem I subunit VIII | 5.29E-13 |
| MluLR17108 | Photosynthesis | Photosystem II reaction centre protein H | 2.33E-11 |
| MluLR17402 | Photosynthesis | Plastocyanin | 3.86E-04 |
| MluLR5294 | Stomatal regulation | Anion transporter 4 | 1.25E-16 |
| MluLR2876 | Stomatal regulation | Ubiquitin-protein ligase E3 | 1.12E-06 |
| MluLR15146 | Abiotic stress responses | FKBP-type peptidyl-prolyl cis-trans isomerase 4 | 8.60E-03 |
| MluLR17105 | Protein metabolism | Ribosomal protein S4 | 2.11E-06 |
| MluLR4945 | Others | Hypothetical protein | 6.12E-08 |
| Down-regulated | |||
| MluLR3628 | Protein metabolism | ORMDL family protein | 6.68E-06 |
| MluLR18372 | Others | Hypothetical protein | 8.79E-11 |
| MluLR18370 | Others | Isoaspartyl peptidase/L-asparaginase 1-like | 4.46E-15 |
| MluLR3563 | Others | Hypothetical protein | 5.37E-05 |
| MluLR18102 | Others | Hypothetical protein | 4.65E-05 |